Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value SEQ14353 401 2e-109 seq2463 125 2e-26 >SEQ14353 Length=1825 Score = 401 bits (444), Expect = 2e-109 Identities = 236/245 (96%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGG 60 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 TTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTA 120 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 468 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC 180 Query 469 GCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 181 GCGCTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGT 240 Query 529 CAACA 533 ||||| Sbjct 241 CAACA 245 Score = 181 bits (200), Expect = 3e-43 Identities = 103/105 (98%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 354 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATCTCTTC 413 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 414 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 458 >seq2463 Length=8979 Score = 125 bits (138), Expect = 2e-26 Identities = 86/97 (89%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 8565 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 8506 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACC 103 ||||||||||||||||||||||||||||||||| || Sbjct 8505 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCC 8469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634806914272