Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20megakarya_20[genbank_20GCA_5F002215365.1_202017-07- 06] 24,039 sequences; 101,504,516 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq965 190 7e-46 >seq965 Length=15598 Score = 190 bits (210), Expect = 7e-46 Identities = 338/491 (69%), Gaps = 33/491 (7%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 5538 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 5596 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| | | | | || |||| ||| | | | |||||||| Sbjct 5597 TACACTGTCT---ATTTATAAAA------AATATTAGTTATTTATTTTAATAAGAGTGGT 5647 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || |||| |||||||| | | | | | |||| ||| || Sbjct 5648 ATTTCAAGGATATCTAAACAATTTACTAGCGTAAAGGTCTAAACGATTACCACTTATGCT 5707 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| ||| Sbjct 5708 ACACATATTATATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 5767 Query 314 CCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 | | | ||| | ||||||| || || | ||| ||||| | | || | | || Sbjct 5768 CTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGA 5826 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 5827 GACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTC 5886 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 5887 GCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT--------- 5937 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 | || || || |||| |||| |||||||||||||||||| ||||| Sbjct 5938 ----------TAATGCGCAAACATCTCCTTTTAATCTTCCAGCACCGGGCAGGTGTCAGA 5987 Query 553 CCGTATACCTC 563 || ||||| || Sbjct 5988 CCCTATACATC 5998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701990760064