Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq290 242 1e-61 >seq290 Length=38076 Score = 242 bits (268), Expect = 1e-61 Identities = 354/499 (71%), Gaps = 36/499 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 33190 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 33131 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 33130 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 33082 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | ||| | | | ||||| | ||||||| ||||||||||||||| Sbjct 33081 TAAAAATTTATAT--------AAAAA---ACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 33033 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA---- 242 | |||| ||||| |||||| |||| |||||||||||||| || |||||||| | Sbjct 33032 TTGTGAAATGTTTGGTTAAATCCCTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 32973 Query 243 -TCATTAAGTTGG-----GCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 | || || | | ||||||| | ||| | ||||||||| Sbjct 32972 ATTATAAAAATAATAAAAGTACTCTAACAAAAAGATTAATGATAGGTTAATGGAAGGTGG 32913 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| || ||||| ||||||||| |||||||||||||||||||||||| | Sbjct 32912 GGATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGATAA 32853 Query 357 ATACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 ||||| | | || | | | || | ||||||| | |||| | ||| |||| Sbjct 32852 TTACAATGAGAGGCAATAATGATAAAAGTTGGAGCAAAT-CTTTAAAAATTATCTTAGTT 32794 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 |||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| |||| Sbjct 32793 CGGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGC 32734 Query 474 ATGCTACGGTGAATACGTT 492 ||||| ||||||||| ||| Sbjct 32733 ATGCTGCGGTGAATATGTT 32715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503958459520