Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq290 122 3e-25 >seq290 Length=38076 Score = 122 bits (134), Expect = 3e-25 Identities = 270/397 (68%), Gaps = 15/397 (4%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||| ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||| Sbjct 38058 TGGAGGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAA 37999 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAG 209 |||||| |||||| || |||||||||| || ||||| ||||| | |||| || | | Sbjct 37998 GGCTAATCAAACTCAGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTTAA 37939 Query 210 TATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCA 269 ||| | ||||||||||||| | ||||||||| | | |||||| || Sbjct 37938 AATCTTTTTTTGGGGTAGAGCACTCATTGAGCTAGGGGG-CGTAAAAACTTACTGAATTC 37880 Query 270 TTGCAAACTCCGAATGC----GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAA 325 ||| ||||||||||| | || | |||| || || | || ||||| Sbjct 37879 TTGGAAACTCCGAATACAAAAAAATGAAATTTA----AATAGACAGACATTAGGCGCTAA 37824 Query 326 GGTCCGTGCCCGAGAGGAGAAGAATCCGGACT-ATCAGCTAAGGCCCCGAAATGACA-GC 383 |||| | | ||||| || | || || | ||| ||||||| | | |||| | | | Sbjct 37823 GGTCTTTTGTCAAGAGGGAAACAGCCCAGATTGATC-GCTAAGGTCTCTAAATAATATTC 37765 Query 384 TAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCC 443 ||||| ||| || ||||| | | ||| | || | || ||||||||||||||| Sbjct 37764 TAAGTGAAA--AAGGAAGTGAAAAAATGATTACAACCAGTAGGTAGGCTTGGAAGCAGCC 37707 Query 444 ATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | || |||||||| |||||| |||||| | ||| || Sbjct 37706 A-TCCTTTAAAGAAAGCGTAATAGCTCATTGGTCTAG 37671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689553333248