Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314345.1_202015-10- 14] 2,762 sequences; 40,062,232 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq290 185 3e-44 >seq290 Length=38076 Score = 185 bits (204), Expect = 3e-44 Identities = 340/494 (69%), Gaps = 41/494 (8%) Strand=Plus/Plus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 36668 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 36726 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 36727 TACACTGTCT---------AT--TTAAAAAATATTAGTTATTTATTTTAATAAGAGTGGT 36775 Query 196 ATTTCAACAACGACTCCACAACC-ACTAGCGTGGCCGCATCATAGTC---TCCCACCTAT 251 ||||||| || || |||| |||||||| ||| || | | |||| ||| Sbjct 36776 ATTTCAAAAATATCTAAACAATTTACTAGCGTAAAG--ATC-TAAACAATTACCACTTAT 36832 Query 252 CCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTT 310 ||||||| | | ||| ||||| ||| | |||| ||||| | |||||||||| Sbjct 36833 ACTACACATATTAAATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTC 36892 Query 311 CGTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 36893 CGTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATT 36951 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 429 |||||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 36952 GGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAAT 37011 Query 430 TTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGC 489 ||||||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 37012 TTCGCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT------ 37065 Query 490 CTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTC 549 | || || || |||| |||| |||||||||||||||||| ||| Sbjct 37066 -------------TAATGCGCAAACATTTCCTTTTAATCTTCCAGCACCGGGCAGGTGTC 37112 Query 550 AGTCCGTATACCTC 563 || || ||||| || Sbjct 37113 AGACCCTATACATC 37126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702352979712