Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1116 381 1e-103 >seq1116 Length=5490 Score = 381 bits (422), Expect = 1e-103 Identities = 243/264 (92%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 5106 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 5165 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||| Sbjct 5166 TTAGTGGGTGAACAATCCAACAATTGGCGAGTTCTACTTCGCAATGATAGGAAGAGCCGA 5225 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 5226 CATCGAAGAATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCC 5285 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||||| | | ||||||||||||||||| Sbjct 5286 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAATTCTAAAGAACTAAAGGATCGATAGG 5345 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||||||||||| Sbjct 5346 CCACGCTTTCACGGTTTGTATTCA 5369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854376350208