Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq293 113 9e-23 >seq293 Length=38087 Score = 113 bits (124), Expect = 9e-23 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||||| | || |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 19262 GACAGTGTATGGTTGGTAGTTTGACTGGGGCGGTCACCTCCTAAAGAGTAACGGAGGTGT 19321 Query 173 CCAAAGATACCCTCAGCTTGGATGGAA--ACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 ||||| || |||| |||||| | | || | | || || || ||||| || Sbjct 19322 ACAAAGGTAAGCTCAAATTGGATAATAGTATCAATTGTAGAGCATAATGGTAAAAGCTTG 19381 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| | | || || | |||||||||||||||| | || ||||||| | Sbjct 19382 CTTGACTGTAAGATAGACATATCAAACAGGGACGAAAGTCGGTCATAGTGATCCGATAAT 19441 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| | |||||| ||||||||||| ||| | ||||||| Sbjct 19442 TCTTTGTGGAAAGATTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 19490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982372807168