Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq293 187 8e-45 >seq293 Length=38087 Score = 187 bits (206), Expect = 8e-45 Identities = 337/491 (69%), Gaps = 35/491 (7%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||| ||||| | |||||||||| |||||||| |||| Sbjct 19329 ACCTTTGTACACCTCCGTTACTCTTTAGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 19271 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| || | || |||| ||| | | | |||||||| Sbjct 19270 TACACTGTCT---------AT--TTAAAAAATATTAGTTATTTATTTTAATAAGAGTGGT 19222 Query 196 ATTTCAACAACGACTCCACAA-CCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| || || |||| |||||||| | | | | |||| ||| || Sbjct 19221 ATTTCAAAAATATCTAAACAATTTACTAGCGTAAAGATCTAAACGATTACCACTTATACT 19162 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG-TCCCGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| |||| || |||||||||| ||| Sbjct 19161 ACACATATTAAATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 19102 Query 314 CCTGCCGCGCGA-AACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGA 372 || | || || ||||||| || || | ||| ||||| | | || | | || Sbjct 19101 -CTAACTATAGAGAATCCGCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGA 19043 Query 373 GACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTC 432 |||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 19042 GACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTC 18983 Query 433 GCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTC 492 |||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 18982 GCTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT--------- 18932 Query 493 ACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGT 552 | || || || |||| |||| |||||||||||||||||| ||||| Sbjct 18931 ----------TAATGCGCAAACATTTCCTTTTAATCTTCCAGCACCGGGCAGGTGTCAGA 18882 Query 553 CCGTATACCTC 563 || ||||| || Sbjct 18881 CCCTATACATC 18871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702352877568