Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20multivora_20[genbank_20GCA_5F001314355.1_202015-10- 14] 2,768 sequences; 40,329,992 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq849 499 9e-139 >seq849 Length=9929 Score = 499 bits (552), Expect = 9e-139 Identities = 426/516 (83%), Gaps = 20/516 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || ||||||||||||||||| Sbjct 4900 GTTCTCATTCCAATTGCCCGACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 4842 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 4841 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 4782 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| Sbjct 4781 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGT 4722 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||| |||| |||||||||||||| | | || ||||| || Sbjct 4721 AGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--GC 4664 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAG--GGC 294 ||| ||||| || ||||||||||| ||| || | | | ||||||| || Sbjct 4663 AAAAG----CGCGATCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAGACTGC 4608 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGT 349 |||| ||| ||||||||||| | ||| |||| ||| ||| ||| |||||| Sbjct 4607 ATTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTTATGCATGT 4549 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 ||||||||||||||||| |||| |||||| |||||||||||||||| | || || ||||| Sbjct 4548 ATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAAC 4489 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATG 468 |||| ||||||||||||||||||||||| ||| | |||| ||||||||||||||||||| Sbjct 4488 TGATATAATGAGCCATTCGCAGTTTCACAGTACAAAATTGTTTATACTTAGACATGCATG 4429 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| ||||||||||||||| Sbjct 4428 GCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 4393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510358192128