Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq5032 78.8 9e-13 seq4926 78.8 9e-13 seq4798 78.8 9e-13 seq4704 78.8 9e-13 seq4499 78.8 9e-13 >seq5032 Length=1990 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 243 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 302 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 303 ACACCTGCCCGGTGCTGGAAGATTAA 328 >seq4926 Length=2181 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 595 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 654 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 655 ACACCTGCCCGGTGCTGGAAGATTAA 680 >seq4798 Length=2370 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 310 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 369 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 370 ACACCTGCCCGGTGCTGGAAGATTAA 395 >seq4704 Length=2492 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 963 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1022 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1023 ACACCTGCCCGGTGCTGGAAGATTAA 1048 >seq4499 Length=2789 Score = 78.8 bits (86), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 |||||||||||| ||||||| || ||||||| || | || || ||||||||| || Sbjct 1511 TGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATGGTAACATGATGTATAGGGTCTG 1570 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||||||||||| ||||| |||| Sbjct 1571 ACACCTGCCCGGTGCTGGAAGATTAA 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476775440777