Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001482985.1_202015-12- 29] 5,317 sequences; 71,413,976 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2968 84.2 3e-14 seq4784 82.4 9e-14 seq4674 82.4 9e-14 seq4308 82.4 9e-14 seq4185 82.4 9e-14 seq3471 82.4 9e-14 seq3385 82.4 9e-14 seq3065 82.4 9e-14 seq3045 82.4 9e-14 seq2935 82.4 9e-14 seq2733 82.4 9e-14 seq2566 82.4 9e-14 seq1805 82.4 9e-14 seq1768 82.4 9e-14 seq2780 78.8 1e-12 seq3573 75.2 1e-11 seq1711 75.2 1e-11 >seq2968 Length=5267 Score = 84.2 bits (92), Expect = 3e-14 Identities = 80/102 (78%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC----G 65 ||||||||||||||| || | | ||| ||||||||||||||||||||||| | Sbjct 394 AAACCAACAAAATAGACCACCAAGGCATATCTTATTATTCCATGCTAATGTATTCAAATG 335 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 || | ||||||||| |||||||||||||| ||| ||||| Sbjct 334 AGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 293 >seq4784 Length=2489 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 2350 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 2409 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 2410 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 2452 >seq4674 Length=2602 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 1782 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 1723 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 1722 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 1680 >seq4308 Length=3138 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 1423 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 1482 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 1483 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 1525 >seq4185 Length=3371 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 303 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 244 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 243 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 201 >seq3471 Length=4276 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 628 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 569 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 568 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 526 >seq3385 Length=4458 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 382 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 441 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 442 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 484 >seq3065 Length=5114 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 2158 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 2099 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 2098 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 2056 >seq3045 Length=5123 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 3689 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 3748 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 3749 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 3791 >seq2935 Length=5297 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 2430 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 2489 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 2490 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 2532 >seq2733 Length=5762 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 5325 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 5384 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 5385 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 5427 >seq2566 Length=6357 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 2544 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 2485 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 2484 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 2442 >seq1805 Length=9089 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 8188 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 8129 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 8128 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 8086 >seq1768 Length=9380 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/103 (79%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 8197 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 8138 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 8137 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 8095 >seq2780 Length=5673 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/103 (78%), Gaps = 5/103 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 |||||||| |||||| || | || ||| ||||||||||||||||||||||| Sbjct 197 AAACCAACCAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 138 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 137 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 95 >seq3573 Length=4035 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 6/103 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||||||| || | || ||| ||||||||||||||||||||||| Sbjct 1676 AAACCAACAAAATAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 1617 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | |||||| || |||||||||||||| ||| ||||| Sbjct 1616 GAGCAAACGCCTGC-TTAAACACTCTAATTTTTTCACAGTAAA 1575 >seq1711 Length=9635 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 6/103 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC---- 64 ||||||||||| ||| || | || ||| ||||||||||||||||||||||| Sbjct 2653 AAACCAACAAA-TAGACCACCAAGGCCATATCTTATTATTCCATGCTAATGTATTCAAAT 2711 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || | ||||||||| |||||||||||||| ||| ||||| Sbjct 2712 GAGCAAACGCCTGCTTTAAACACTCTAATTTTTTCACAGTAAA 2754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595169342178