Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001483015.1_202015-12- 29] 6,142 sequences; 81,610,141 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4083 232 2e-58 seq3307 232 2e-58 seq1731 232 2e-58 seq702 232 2e-58 seq116 232 2e-58 seq1542 230 7e-58 seq3148 132 1e-28 seq335 104 7e-20 >seq4083 Length=11212 Score = 232 bits (256), Expect = 2e-58 Identities = 353/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 8268 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 8209 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 8208 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 8160 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 8159 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 8111 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 8110 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 8051 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 8050 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 7991 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 7990 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 7932 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 7931 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 7873 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 7872 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 7813 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 7812 TGCTGCGGTGAATATGTT 7795 >seq3307 Length=10392 Score = 232 bits (256), Expect = 2e-58 Identities = 353/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 9005 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 9064 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 9065 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 9113 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 9114 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 9162 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 9163 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 9222 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 9223 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 9282 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 9283 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 9341 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 9342 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 9400 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 9401 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 9460 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 9461 TGCTGCGGTGAATATGTT 9478 >seq1731 Length=9262 Score = 232 bits (256), Expect = 2e-58 Identities = 353/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 5948 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 5889 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 5888 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 5840 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 5839 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 5791 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 5790 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 5731 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 5730 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 5671 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 5670 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 5612 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 5611 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 5553 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 5552 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 5493 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 5492 TGCTGCGGTGAATATGTT 5475 >seq702 Length=10881 Score = 232 bits (256), Expect = 2e-58 Identities = 353/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 4776 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 4717 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 4716 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 4668 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 4667 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 4619 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 4618 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 4559 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 4558 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 4499 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 4498 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 4440 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 4439 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 4381 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 4380 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 4321 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 4320 TGCTGCGGTGAATATGTT 4303 >seq116 Length=10949 Score = 232 bits (256), Expect = 2e-58 Identities = 353/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1016 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 1075 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 1076 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 1124 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 1125 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 1173 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 1174 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 1233 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 1234 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 1293 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 1294 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 1352 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 1353 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 1411 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 1412 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 1471 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 1472 TGCTGCGGTGAATATGTT 1489 >seq1542 Length=8130 Score = 230 bits (254), Expect = 7e-58 Identities = 352/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 3336 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 3395 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||| ||| ||||| || | | | | | Sbjct 3396 TAATTCGATAATACGCGCAGAACCTTANCAACTCTTG-------CTAA----TTTTTATA 3444 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 3445 TAAAATATT----------ANATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 3493 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 3494 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 3553 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 3554 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTNAATGGAAGGTGGGG 3613 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 3614 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 3672 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 3673 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 3731 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 3732 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 3791 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 3792 TGCTGCGGTGAATATGTT 3809 Score = 228 bits (252), Expect = 2e-57 Identities = 352/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 4468 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 4409 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 4408 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 4360 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 4359 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 4311 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TC 244 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 4310 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTT 4251 Query 245 ATT------AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || | ||||||| | ||| | ||||||||||| Sbjct 4250 ATTTAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 4191 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 4190 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 4132 Query 359 -ACAAAGGGCAGCGAAACCG---CGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| | | || | | | | | ||||||| | |||| | ||| ||||| Sbjct 4131 CACAATGAGAGGCAATAATGATAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 4073 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 4072 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 4013 Query 475 TGCTACGGTGAATACGTT 492 |||| | ||||||| ||| Sbjct 4012 TGCTGCNGTGAATATGTT 3995 >seq3148 Length=3308 Score = 132 bits (146), Expect = 1e-28 Identities = 169/234 (72%), Gaps = 22/234 (9%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 ||| || |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1883 CGCNAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 1824 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 1823 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 1775 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 1774 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 1726 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 | |||| ||||| |||||| ||| |||||||||||||| || |||||||| Sbjct 1725 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGC 1672 Score = 131 bits (144), Expect = 5e-28 Identities = 162/223 (73%), Gaps = 22/223 (10%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1429 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 1488 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 1489 TAATTCGATAATACGCGNAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 1537 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | || | | | ||||| | ||||||| ||||||||||||||| Sbjct 1538 TAAAATATT----------ATATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 1586 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTA 229 | |||| ||||| |||||| ||| |||||||||||||| || Sbjct 1587 TTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTA 1629 >seq335 Length=47939 Score = 104 bits (114), Expect = 7e-20 Identities = 81/97 (84%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| ||||| || |||||||||||||| Sbjct 43583 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTTTACACAATCGTTGGAGCATGTGGTT 43524 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG 103 |||||| | |||||| ||||||||||||| ||||| Sbjct 43523 TAATTCAATAAAACGCGCAGAACCTTACCAACTCTTG 43487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503907624320