Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20nicotianae_20[genbank_20GCA_5F001483015.1_202015-12- 29] 6,142 sequences; 81,610,141 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq4083 91.5 1e-16 seq3307 91.5 1e-16 seq1731 91.5 1e-16 seq1542 91.5 1e-16 seq702 91.5 1e-16 seq116 91.5 1e-16 >seq4083 Length=11212 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 7934 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 7993 Query 141 CACCTTCC 148 |||||||| Sbjct 7994 CACCTTCC 8001 >seq3307 Length=10392 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 9339 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 9280 Query 141 CACCTTCC 148 |||||||| Sbjct 9279 CACCTTCC 9272 >seq1731 Length=9262 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 5614 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 5673 Query 141 CACCTTCC 148 |||||||| Sbjct 5674 CACCTTCC 5681 >seq1542 Length=8130 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 3670 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 3611 Query 141 CACCTTCC 148 |||||||| Sbjct 3610 CACCTTCC 3603 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 4134 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 4193 Query 141 CACCTTCC 148 |||||||| Sbjct 4194 CACCTTCC 4201 >seq702 Length=10881 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 4442 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 4501 Query 141 CACCTTCC 148 |||||||| Sbjct 4502 CACCTTCC 4509 >seq116 Length=10949 Score = 91.5 bits (100), Expect = 1e-16 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 81 TACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCC 140 || ||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||| Sbjct 1350 TATCATTGTAGCACGTGTGTAGCCCAACTCATAAGGGCCATGAAGACTTGACGTCATCCC 1291 Query 141 CACCTTCC 148 |||||||| Sbjct 1290 CACCTTCC 1283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415975247740