Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509485.1_202013-12- 18] 6,813 sequences; 47,449,104 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4151 132 2e-28 seq5725 127 7e-27 >seq4151 Length=1878 Score = 132 bits (146), Expect = 2e-28 Identities = 169/229 (74%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 85 CCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAG-----GA 139 ||||||||||||||||||||||| ||||| || || | || || | || || Sbjct 227 CCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTCACCCAGGCAAAAGCCCGA 168 Query 140 CCTTAACGCCAGAAA--ATGGTCGGTGAAGAC---CAGTTCCG-CTTCATTGATTAAGTa 193 |||| | |||| | | | | |||| | ||| | | | |||| | |||||| Sbjct 167 GCTTACAACTAGAACTGAGCGGCCGCGAAGCCACGCAGATGCTACATCATGGTATAAGTA 108 Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA 253 ||| ||| | || ||||||||||||||| || | | | ||||||||||||||||| Sbjct 107 AAACAACATTGAGAGTAGTGGTATTTCACGGACGGCAGAGC--CTCCCACTTATTCTACA 50 Query 254 CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||| ||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 49 CCTCCCAAGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAACAGGGT 1 >seq5725 Length=7311 Score = 127 bits (140), Expect = 7e-27 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 157 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 216 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 |||||||||||||||||||||||||||||||||| Sbjct 217 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635088593824