Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509505.1_202013-12- 18] 6,724 sequences; 47,809,385 total letters Query= NC_027197.1 Length=3753 Score E Sequences producing significant alignments: (Bits) Value seq6103 2367 0.0 seq6104 2322 0.0 seq6105 2037 0.0 seq6106 86.0 1e-13 >seq6103 Length=1453 Score = 2367 bits (2624), Expect = 0.0 Identities = 1323/1330 (99%), Gaps = 0/1330 (0%) Strand=Plus/Minus Query 2424 CTTCCAGAATACTATGAACGGAAATGGAAGTGGTGAAGGTGACGGGTCTGGTAACCAAGC 2483 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1453 CTTCCAGAATACTATGAACGGAAATGGAAGTGGTGAAGGTGACGGATCTGGTAACCAAGC 1394 Query 2484 CGGTCTTCGAGAGACTCCAATCGATAATCCCTATGTCGTGTTCAGAGGACCACCAGACTA 2543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1393 CGGTCTTCGAGAGACTCCAATCGATAATCCCTATGTCGTGTTCAGAGGACCACCAGACTA 1334 Query 2544 TACGTTCGCGAGTCTGCCGTATGTTGAAACGCGATACGCGGGTATTGCAGACTACTATTC 2603 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1333 TACGTTCGCGAGTCTGCCGTATGTTGAAACGCGATACGCGGATATTGCAGACTACTATTC 1274 Query 2604 GAGAGATCATATCTTTCGTCTGACCTCACCATACGATTGTTCGCAAGCCAATTCTGTTGT 2663 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1273 GAGAGATCATATCTTTCGTCTGACCTCACCATACGATTGTTCGCAAGCCAATTCTGTTGT 1214 Query 2664 TGGCATTAACGCTGGTGCTGGTGTTACAAACATTACTCCTGAGAGCGCTGATGGAACGTT 2723 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 TGACATTAACGCTGGTGCTGGTGTTACAAACATTACTCCTGAGAGCGCTGATGGAACGTT 1154 Query 2724 GCAATCGGCCCGGTGGTTTAACTACTACTCCGGACTATACAACTACTATCATGTGGTATC 2783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1153 GCAATCGGCCCGGTGGTTTAACTACTACTCCGGACTATACAACTACTATCATGTGGTATC 1094 Query 2784 GTGCCAGTACAATGTGTTTGTGGAGAACTTATCTACAGAACCTTTGTGGGTATACCGACT 2843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1093 GTGCCAGTACAATGTGTTTGTGGAGAACTTATCTACAGAACCTTTGTGGGTATACCGACT 1034 Query 2844 CTTCTACAACGATGACCAGCCAAATACACTGGCTAGTAACGACGATATGCAGCTGTGGCC 2903 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1033 CTTCTACAACGATGACCAGCCAAATACACTGGCTAGTAACGACGATATGCAGCTGTGGCC 974 Query 2904 AAACACAATGTACCACTATCTCGATCGCCGTGCTCTTGCTATCACTGGAACTGGAAAAGT 2963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 973 AAACACAATGTACCACTATCTCGATCGCCGTGCTCTTGCTATCACTGGAACTGGAAAAGT 914 Query 2964 TGAAGTTGCAGGAGAACATCCTGATGACACCATCAATGCTGAGAACATCAACTCGACTGC 3023 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 913 TGAAGTTGCAGGAGAACATCCTGATGACACCATCAATGCTGAGAACATCAACTCGACTGC 854 Query 3024 CTTGATAGACAATTTTGAGAATACGAACATGGTGGCAAACAATGGTGTATCCAAGTGTGT 3083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 853 CTTGATAGACAATTTTGAGAATACGAACATGGTGGCAAACAATGGTGTATCCAAGTGTGT 794 Query 3084 CATTTCTGGAGAATACCGTACTGGTCAACACACAGGAGAAATTCGTTTGGATTCATCAGT 3143 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 793 CATTTCTGGAGAATACCGTACTGGTCAACACACAAGAGAAATTCGTTTGGATTCATCAGT 734 Query 3144 TGAGAATTGGACGGCTACTAACACAAACCCTCTACTTCCGGAGAAACTATTGATTCGTGT 3203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 733 TGAGAATTGGACGGCTACTAACACAAACCCTCTACTTCCGGAGAAACTATTGATTCGTGT 674 Query 3204 GAAGCCTGTGAATGATACAGTTCGTCTAAACAGTGCTACTAGTTCTGGTGACGATCTTAA 3263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 GAAGCCTGTGAATGATACAGTTCGTCTAAACAGTGCTACTAGTTCTGGTGACGATCTTAA 614 Query 3264 GTACAAGATTGTTGTGAAGCTGAACTACCTTGTCGAGTTCAAGGAACTTCCTGTCGGTCT 3323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 613 GTACAAGATTGTTGTGAAGCTGAACTACCTTGTCGAGTTCAAGGAACTTCCTGTCGGTCT 554 Query 3324 ACGTTATCCAGTGCAAAGACAACCTTTGACTGTTACAATTGCTGCTGACGTGGAGTCTAC 3383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 ACGTTATCCAGTGCAAAGACAACCTTTGACTGTTACAATTGCTGCTGACGTGGAGTCTAC 494 Query 3384 GAACTAATGGTTCACACAAGAAGGCAAATCCGTCGTGCGCACGATGACTATCTTCAAGCG 3443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 493 GAACTAATGGTTCACACAAGAAGGCAAATCCGTCGTGCGCACGATGACTATCTTCAAGCG 434 Query 3444 ATACGGAATTCGGTTGTACACCAACGACAACCAAGGCGTAACTTTTGGGATCAAGTGAGT 3503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 433 ATACGGAATTCGGTTGTACACCAACGACAACCAAGGCGTAACTTTTGGGATCAAGTGAGT 374 Query 3504 CAACATGGATGGGAACAGATGCTTCTAAATGCGAGACGTCAAGTGTTTCCTAAGAGATAT 3563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 373 CAACATGGATGGGAACAGATGCTTCTAAATGCGAGACGTCAAGTGTTTCCTAAGAGATAT 314 Query 3564 AAACCAGAGGATACTGCGCATCGTCACCGTCTAGAAGGTGAGCAAGATAAGGATGTGTCT 3623 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 313 AAACCAGAGGATACTGCGCATCGTCACCGTCTAGAAGATGAGCAAGATAAGGATGTGTCT 254 Query 3624 GTGCGTAGTTATACCAGACGTAGTTTAAGAAAATGTATTTGATTTCTGATTGTGTTAAAG 3683 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 253 GTGCGTAGTTATACCAGACGTAGTTAAAAAAAATGTATTTGATTTCTGATTGTGTTAAAG 194 Query 3684 AATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGCGGTGGCAGAGCT 3743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 193 AATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGCGGTGGCAGAGCT 134 Query 3744 CGAGCTCTAT 3753 |||||||||| Sbjct 133 CGAGCTCTAT 124 Score = 134 bits (148), Expect = 3e-28 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 1 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 183 Query 61 CTTGTACCTTCTTTCACACTAT 82 ||||||| |||||| |||| || Sbjct 184 CTTGTACATTCTTTAACACAAT 205 >seq6104 Length=1304 Score = 2322 bits (2574), Expect = 0.0 Identities = 1304/1318 (99%), Gaps = 14/1318 (1%) Strand=Plus/Minus Query 1064 CCGCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTA 1123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1304 CCGCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTA 1245 Query 1124 CCTTGTTCCACGTAACCGTGATCTGCCTATCCAAGGCTGGATCGATCATCACACCAAGTC 1183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1244 CCTTGTTCCACGTAACCGTGATCTGCCTATCCAAGGCTGGATCGATCATCACACCAAGTC 1185 Query 1184 AAAAACGAAAATCAACGAGGACTTCAAGCTGTATGAGTACGGCACTCTACCTGCTGACAA 1243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 AAAAACGAAAATCAACGAGGACTTCAAGCTGTATGAGTACGGCACTCTACCTGCTGACAA 1125 Query 1244 ACCCAATATCTCTGCTCAAGTGACCAAGAGATCGCCAGAGGAAAAGAAGAGAAAACTTGA 1303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124 ACCCAATATCTCTGCTCAAGTGACCAAGAGATCGCCAGAGGAAAAGAAGAGAAAACTTGA 1065 Query 1304 CGATGTCATCAAGGAGATGCGAGGCATGATCGAAGAAGGACGCGAAGAGGAAGCCTTCAC 1363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 CGATGTCATCAAGGAGATGCGAGGCATGATCGAAGAAGGACGCGAAGAGGAAGCCTTCAC 1005 Query 1364 CAAGTTTCCTCGAAACTACTTGACCTATGGAGAAAAGCTGAAAGCTATGATCTCACAGCG 1423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1004 CAAGTTTCCTCGAAACTACTTGACCTATGGAGAAAAGCTGAAAGCTATGATCTCACAGCG 945 Query 1424 TCGTGACTTTTTCAAGAGCAACGGTGACCCTCACATCTGGCTTACTGGTACTCCTGGTTC 1483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 944 TCGTGACTTTTTCAAGAGCAACGGTGACCCTCACATCTGGCTTACTGGTACTCCTGGTTC 885 Query 1484 TGGCAAGTCTGCCATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAATCTGGACAA 1543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884 TGGCAAGTCTGCCATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAATCTGGACAA 825 Query 1544 CCGTTTCTTCGACTTGTACCAGCCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGA 1603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 824 CCGTTTCTTCGACTTGTACCAGCCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGA 765 Query 1604 TCACACGACGGTTGAAAAGTTGGGAGTCCAGTTCCTAAAGACCATCTGTGACGAAGCTGG 1663 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 764 TCACACGACGGTTGAAAAGTTGGGAG--------------ACCATCTGTGACGAAGCTGG 719 Query 1664 TTTCCCAGTTGACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTC 1723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 TTTCCCAGTTGACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTC 659 Query 1724 TTCCAACTTCACCATCAACGATGTGATTCCGGAAGACATGCCAGGACGCAATGAAAATCT 1783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 TTCCAACTTCACCATCAACGATGTGATTCCGGAAGACATGCCAGGACGCAATGAAAATCT 599 Query 1784 AACGGCTCTGCGTCGTCGCTTCTATGAAGTGAACGTTCGTGTTCTTTTGCAGATACTCGG 1843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 AACGGCTCTGCGTCGTCGCTTCTATGAAGTGAACGTTCGTGTTCTTTTGCAGATACTCGG 539 Query 1844 ACTGAAGCTTCTGTCGAAGTACGAACTGAACGGCTTGAAACGCGTGGGAAATCAAGATCC 1903 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 ACTGAAGCTTCTGTCGAAGTACGAACTGAACGGCTTGAAACGCGTGGGAAATCAAGATCC 479 Query 1904 AACCAAACTCTTCATGTCGTGGGATTACACTCGTGACATTCCCACTGGAGAGTCGTTGAA 1963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 AACCAAACTCTTCATGTCGTGGGATTACACTCGTGACATTCCCACTGGAGAGTCGTTGAA 419 Query 1964 GACTGCCAAGGAATACCAGCAGATCATCAAGGATCACTACTACGGAACGAACACTTCGCC 2023 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 GACTGCCAAGGAATACCAGCAGATCATCAAGGATCACTACTACGGAACGAACACTTCGCC 359 Query 2024 TCACTCGAGTCAGTAAGTAAAAGACGATGTGGGACTTAACACTGCCAGGATACAAGTATC 2083 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TCACTCGAGTCAGTAAGTAAAAGACGATGTGGGACTTAACACTGCCAGGATACAAGTATC 299 Query 2084 TAGGACCAGGAAACAAACTTGACAAGGGAGAATCAAATAACGAGAATGACAGAGTTGCTT 2143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 TAGGACCAGGAAACAAACTTGACAAGGGAGAATCAAATAACGAGAATGACAGAGTTGCTT 239 Query 2144 TAGCACATGATATTGCTTATGATTTCTTGGaaaaaaaaGGATTCAATCCATATACACAAT 2203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 TAGCACATGATATTGCTTATGATTTCTTGGAAAAAAAAGGATTCAATCCATATACACAAT 179 Query 2204 ATGGAAAAGACGATGAACGAGCATATCAAGAATTCTCATTTAACGATTACGGTGGAGCGC 2263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 ATGGAAAAGACGATGAACGAGCATATCAAGAATTCTCATTTAACGATTACGGTGGAGCGC 119 Query 2264 TAGGAAAACTGTACTTTGGTATAAAACGTAATGCAGCAAAAGCTGGATTAGTAGGACCAC 2323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 TAGGAAAACTGTACTTTGGTATAAAACGTAATGCAGCAAAAGCTGGATTAGTAGGACCAC 59 Query 2324 CAGGAAAGCGTCTTCGAGGAAAACATTGGGACGATAAAAAAGATGGTCAATCACCTGG 2381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CAGGAAAGCGTCTTCGAGGAAAACATTGGGACGATAAAAAAGATGGTCAATCACCTGG 1 >seq6105 Length=1331 Score = 2037 bits (2258), Expect = 0.0 Identities = 1151/1169 (98%), Gaps = 15/1169 (1%) Strand=Plus/Minus Query 1 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1169 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 1110 Query 61 CTTGTACCTTCTTTCACACTATTCATACAATCATTCTTAAGACAAACAACAATCATTCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 CTTGTACCTTCTTTCACACTATTCATACAATCATTCTTAAGACAAACAACAATCATTCAG 1050 Query 121 ATGAAATGAGACATGTATTATGTAGTTACACATCCATGAAATCGCGCATTTCCTTTTCCG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1049 ATGAAATGAGACATGTATTATGTAGTTACACATCCATGAAATCGCGCATTTCCTTTTCCG 990 Query 181 TCAGCTCCAAGATGTCGATGACCGAGTCACGATCATCTTCATCTTCTTGGGTTGGCTCCA 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 989 TCAGCTCCAAGATGTCGATGATCGAGTCACGATCATCTTCATCTTCTTGGGTTGGCTCCA 930 Query 241 TCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAATGATGAAACT 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 929 TCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAACGATGAAACT 870 Query 301 CGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCGTTATTGATGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 869 CGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCGTTATTGATGA 810 Query 361 AATATTCCCTCGCGATCAGATCCATCATCTCAATCGCTGCATGCAAATCTCGCAGCTCTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 809 AATATTCCCTCGCGATCAGATCCATCATCTCAATCGCTGCATGCAAATCTCGCAGCTCTT 750 Query 421 GCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGGCGAGTAAGGC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 749 GCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGGCGAGTAAGGC 690 Query 481 GTAGACGCAACGCCTGCGCTTCGTTCAAGGCCGTACGTAGCTTGTCATGGAGCGCCTTGT 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 689 GTAGACGCAACGCCTGCGCTTCGTTCATGGCCGTACGTAGCTTGTCATGGAGCGCCTTGT 630 Query 541 TCTCTTCGACGATAAAACTCTCGACGAGTTCCGTCACGATGTTATGGTGTTGTTCGTGCG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 629 TCTCTTCGACGATAAAACTCTCGACGAGTTCCGTCACGATGTTATGGTGTTGTTCGTGCG 570 Query 601 CCATGGCAG---------------ATTCCTGCCGCAAGGTAAAAGATCTCAACGTACCTC 645 ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 569 CCATGGCAGATTCTGGAATGGCAGATTCCTGCCGCAAGGTAAAAGATCTCAACGTACCTC 510 Query 646 TAGGAGGTAACGTTCCATATTTCTAACCGCGGTAAGAAACATTTGTATTCATGTTCAAGT 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 509 TAGGAGGTAACGTTCCATATTTCTAACCGCGGTAAGAAACATTTGTATTCATGTTCAAGT 450 Query 706 ACCATCATTCTATTTAGAAATTTTTCTATGTTCTATTACAGAGACACTCCTCTATACGAA 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 449 ACCATCATTCTATTTAGAAATTTTTCTATGTTCTATTACAGAGACACTCCTCTATACGAA 390 Query 766 CAAAGACATTCACAAAAGTCCGTTAGCTCATTTCCAATCTTACCGGCAAATAAAAACTTC 825 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 389 CAAAGACATTCACAAAAGTCCGTTAGCTCATTTCCAATCTTACCGGCAAATAAAAACTTC 330 Query 826 TCTTCTCTCCAACAACCATGGCCCCTCTTGTTCCTTTCCACACTATGGACCGTCAGTGGG 885 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 TCTTCTCTCCAACAACCATGGCCCCTCTTGTTCCTTTCCACACTATGGACCGTCAGTGGG 270 Query 886 ACGCACGCTTCAATGTACCTACCGATGAAGATCTCGAGGCTCTCCTTCTCAATGTCAAGA 945 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 269 ACGCACGCTTCAATGTACCTACCGATGAAGATCTCGAGGCTCTCCTTCTCAATGTCAAGA 210 Query 946 GCGAAGTTGACCAAGGAAAGTTCCAATACTGCCTCGTCGGTGGAGTAGAGATCGGTGATC 1005 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 GCGAAGTTGACCAAGGAAAGTTCCAATACTGCCTCGTCGGTGGAGTAGAGATCGGTGATC 150 Query 1006 GTCCTTACCAAACGGACTACCTCATCAAGCACGTGCACGTAGCTCTGGTGTACAATAACC 1065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 149 GTCCTTACCAAACGGACTACCTCATCAAGCACGTGCACGTAGCTCTGGTGTACAATAACC 90 Query 1066 GCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTACC 1125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 GCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTACC 30 Query 1126 TTGTTCCACGTAACCGTGATCTGCCTATC 1154 ||||||||||||||||||||||||||||| Sbjct 29 TTGTTCCACGTAACCGTGATCTGCCTATC 1 Score = 134 bits (148), Expect = 3e-28 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 3672 ATTGTGTTAAAGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 3731 || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1088 ATAGTGTGAAAGAAGGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 1147 Query 3732 GGTGGCAGAGCTCGAGCTCTAT 3753 |||||||||||||||||||||| Sbjct 1148 GGTGGCAGAGCTCGAGCTCTAT 1169 Score = 84.2 bits (92), Expect = 5e-13 Identities = 74/89 (83%), Gaps = 5/89 (6%) Strand=Plus/Plus Query 1 ATAGAGCTCGAGCTC--TGCCACCGCCGGG--TAAAACTAATAGAAAAGAAGTACAGCGC 56 ||||||||||||||| ||||||||||| | |||||| |||||||||||||||| |||| Sbjct 1196 ATAGAGCTCGAGCTCCATGCCACCGCCGTGACTAAAAC-AATAGAAAAGAAGTACGGCGC 1254 Query 57 TACGCTTGTACCTTCTTTCACACTATTCA 85 |||||| |||||||||| | |||| Sbjct 1255 TACGCTGCCGTCTTCTTTCACCATCTTCA 1283 Score = 78.8 bits (86), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 5/66 (8%) Strand=Plus/Minus Query 3692 AGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTA--CCCGGCGGTGGCA--GAGCTCGAG 3747 |||||||||| |||||||||||||||| |||||| | ||||||||||| ||||||||| Sbjct 1260 AGCGTAGCGCCGTACTTCTTTTCTATT-GTTTTAGTCACGGCGGTGGCATGGAGCTCGAG 1202 Query 3748 CTCTAT 3753 |||||| Sbjct 1201 CTCTAT 1196 >seq6106 Length=8992 Score = 86.0 bits (94), Expect = 1e-13 Identities = 194/292 (66%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 231 GTTGGCTCCATCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAA 290 || || ||||| | |||| || ||||| ||| || | ||||||||| |||| | Sbjct 681 GTAGGTTCCATGAGAATGGTCAGATCCGAATAAAAGCCGACGTTCGCTTCCAGGATCATA 740 Query 291 TGATGAAACTCGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCG 350 | | ||| | || | || ||||||| || ||||||| |||| ||||||||| Sbjct 741 CGGTCAAAGCCAGGGTCCCCATACTCACAGTAAGGACCCCAACGAACACGCGCCTCCGCG 800 Query 351 TTATTGATGAAATATTCCCTCGCGATCAGATCCATCATCTCAATCGCTGCATGCAAATCT 410 | || | ||| || | | || || |||||||||||| |||| || | | | || Sbjct 801 TGGTTCACGAAGTACGCACGAGCAATGAGATCCATCATCCCAATGGCGGAGCGTAGCTCC 860 Query 411 CGCAGCTCTTGCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGG 470 |||| ||| || | || ||||| | || || |||||||| |||| ||| || Sbjct 861 CGCAACTCGGATTGTAAACGCCCGTTTAAGCCGCCAGCCATGTTTTACAGCGTCGAGAGA 920 Query 471 CGAGTAAGGCGTAGACGCAACGCCTGCGCTTCGTTCAAGGCCGTACGTAGCT 522 || || | | ||||||||| | ||| || || | |||||||| |||| Sbjct 921 CGGGTCAACATCAAACGCAACGCGTTCGCGTCATTAAGAGCCGTACGGAGCT 972 Score = 82.4 bits (90), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 5/88 (6%) Strand=Plus/Plus Query 2 TAGAGCTCGAGCTC--TGCCACCGCCGGG--TAAAACTAATAGAAAAGAAGTACAGCGCT 57 |||||||||||||| ||||||||||| | |||||| |||||||||||||||| ||||| Sbjct 418 TAGAGCTCGAGCTCCATGCCACCGCCGTGACTAAAAC-AATAGAAAAGAAGTACGGCGCT 476 Query 58 ACGCTTGTACCTTCTTTCACACTATTCA 85 ||||| |||||||||| | |||| Sbjct 477 ACGCTGCCGTCTTCTTTCACCATCTTCA 504 Score = 77.0 bits (84), Expect = 8e-11 Identities = 58/65 (89%), Gaps = 5/65 (8%) Strand=Plus/Minus Query 3692 AGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTA--CCCGGCGGTGGCA--GAGCTCGAG 3747 |||||||||| |||||||||||||||| |||||| | ||||||||||| ||||||||| Sbjct 481 AGCGTAGCGCCGTACTTCTTTTCTATT-GTTTTAGTCACGGCGGTGGCATGGAGCTCGAG 423 Query 3748 CTCTA 3752 ||||| Sbjct 422 CTCTA 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11896725005880