Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509525.1_202013-12- 18] 6,791 sequences; 47,716,731 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4057 122 3e-25 >seq4057 Length=9074 Score = 122 bits (134), Expect = 3e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | ||||||||| |||| ||||| Sbjct 8985 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACCCCTGTGTTATC 8926 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 101 |||||||||||||||||||||||||||||||||| Sbjct 8925 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCA 8891 Score = 86.0 bits (94), Expect = 2e-14 Identities = 139/196 (71%), Gaps = 13/196 (7%) Strand=Plus/Minus Query 85 CCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAG-----GA 139 ||||||||||||||||||||||| ||||| || || | || || | || || Sbjct 194 CCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTCACCCAGGTAAAAGCCCGA 135 Query 140 CCTTAACGCCAGAAA--ATGGTCGGTGAAGAC---CAGTTCCG-CTTCATTGATTAAGTa 193 |||| | |||| | ||| | |||| | ||| | | | |||| | |||||| Sbjct 134 GCTTACAACTAGAACTGAGCGTCCGCGAAGCCACGCAGATGCTACATCATGGTATAAGTA 75 Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA 253 ||| ||| | || ||||||||||||||| || | | | ||||||||||||||||| Sbjct 74 AAACAACATTGAGAGTAGTGGTATTTCACGGACGGCAGAGC--CTCCCACTTATTCTACA 17 Query 254 CCTCTCAAGTCATTTC 269 |||| ||||||||||| Sbjct 16 CCTCCCAAGTCATTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635088953568