Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20parasitica_20[genbank_20GCA_5F000509525.1_202013-12- 18] 6,791 sequences; 47,716,731 total letters Query= NC_027197.1 Length=3753 Score E Sequences producing significant alignments: (Bits) Value seq6110 4744 0.0 seq6109 2195 0.0 seq6108 610 2e-171 >seq6110 Length=11014 Score = 4744 bits (5260), Expect = 0.0 Identities = 2673/2708 (99%), Gaps = 29/2708 (1%) Strand=Plus/Minus Query 1 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2694 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 2635 Query 61 CTTGTACCTTCTTTCACACTATTCATACAATCATTCTTAAGACAAACAACAATCATTCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2634 CTTGTACCTTCTTTCACACTATTCATACAATCATTCTTAAGACAAACAACAATCATTCAG 2575 Query 121 ATGAAATGAGACATGTATTATGTAGTTACACATCCATGAAATCGCGCATTTCCTTTTCCG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2574 ATGAAATGAGACATGTATTATGTAGTTACACATCCATGAAATCGCGCATTTCCTTTTCCG 2515 Query 181 TCAGCTCCAAGATGTCGATGACCGAGTCACGATCATCTTCATCTTCTTGGGTTGGCTCCA 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2514 TCAGCTCCAAGATGTCGATGATCGAGTCACGATCATCTTCATCTTCTTGGGTTGGCTCCA 2455 Query 241 TCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAATGATGAAACT 300 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2454 TCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAACGATGAAACT 2395 Query 301 CGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCGTTATTGATGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2394 CGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCGTTATTGATGA 2335 Query 361 AATATTCCCTCGCGATCAGATCCATCATCTCAATCGCTGCATGCAAATCTCGCAGCTCTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2334 AATATTCCCTCGCGATCAGATCCATCATCTCAATCGCTGCATGCAAATCTCGCAGCTCTT 2275 Query 421 GCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGGCGAGTAAGGC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2274 GCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGGCGAGTAAGGC 2215 Query 481 GTAGACGCAACGCCTGCGCTTCGTTCAAGGCCGTACGTAGCTTGTCATGGAGCGCCTTGT 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2214 GTAGACGCAACGCCTGCGCTTCGTTCATGGCCGTACGTAGCTTGTCATGGAGCGCCTTGT 2155 Query 541 TCTCTTCGACGATAAAACTCTCGACGAGTTCCGTCACGATGTTATGGTGTTGTTCGTGCG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2154 TCTCTTCGACGATAAAACTCTCGACGAGTTCCGTCACGATGTTATGGTGTTGTTCGTGCG 2095 Query 601 CCATGGCAGATTC---------------CTGCCGCAAGGTAAAAGATCTCAACGTACCTC 645 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2094 CCATGGCAGATTCTGGAATGGCAGATTCCTGCCGCAAGGTAAAAGATCTCAACGTACCTC 2035 Query 646 TAGGAGGTAACGTTCCATATTTCTAACCGCGGTAAGAAACATTTGTATTCATGTTCAAGT 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2034 TAGGAGGTAACGTTCCATATTTCTAACCGCGGTAAGAAACATTTGTATTCATGTTCAAGT 1975 Query 706 ACCATCATTCTATTTAGAAATTTTTCTATGTTCTATTACAGAGACACTCCTCTATACGAA 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1974 ACCATCATTCTATTTAGAAATTTTTCTATGTTCTATTACAGAGACACTCCTCTATACGAA 1915 Query 766 CAAAGACATTCACAAAAGTCCGTTAGCTCATTTCCAATCTTACCGGCAAATAAAAACTTC 825 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1914 CAAAGACATTCACAAAAGTCCGTTAGCTCATTTCCAATCTTACCGGCAAATAAAAACTTC 1855 Query 826 TCTTCTCTCCAACAACCATGGCCCCTCTTGTTCCTTTCCACACTATGGACCGTCAGTGGG 885 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1854 TCTTCTCTCCAACAACCATGGCCCCTCTTGTTCCTTTCCACACTATGGACCGTCAGTGGG 1795 Query 886 ACGCACGCTTCAATGTACCTACCGATGAAGATCTCGAGGCTCTCCTTCTCAATGTCAAGA 945 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1794 ACGCACGCTTCAATGTACCTACCGATGAAGATCTCGAGGCTCTCCTTCTCAATGTCAAGA 1735 Query 946 GCGAAGTTGACCAAGGAAAGTTCCAATACTGCCTCGTCGGTGGAGTAGAGATCGGTGATC 1005 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1734 GCGAAGTTGACCAAGGAAAGTTCCAATACTGCCTCGTCGGTGGAGTAGAGATCGGTGATC 1675 Query 1006 GTCCTTACCAAACGGACTACCTCATCAAGCACGTGCACGTAGCTCTGGTGTACAATAACC 1065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1674 GTCCTTACCAAACGGACTACCTCATCAAGCACGTGCACGTAGCTCTGGTGTACAATAACC 1615 Query 1066 GCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTACC 1125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1614 GCGTCTCGAAGAACTCCGTGCTGAAGAATCTTCAAATCAAGCAAGGCAATGGCTATTACC 1555 Query 1126 TTGTTCCACGTAACCGTGATCTGCCTATCCAAGGCTGGATCGATCATCACACCAAGTCAA 1185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 TTGTTCCACGTAACCGTGATCTGCCTATCCAAGGCTGGATCGATCATCACACCAAGTCAA 1495 Query 1186 AAACGAAAATCAACGAGGACTTCAAGCTGTATGAGTACGGCACTCTACCTGCTGACAAAC 1245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 AAACGAAAATCAACGAGGACTTCAAGCTGTATGAGTACGGCACTCTACCTGCTGACAAAC 1435 Query 1246 CCAATATCTCTGCTCAAGTGACCAAGAGATCGCCAGAGGAAAAGAAGAGAAAACTTGACG 1305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1434 CCAATATCTCTGCTCAAGTGACCAAGAGATCGCCAGAGGAAAAGAAGAGAAAACTTGACG 1375 Query 1306 ATGTCATCAAGGAGATGCGAGGCATGATCGAAGAAGGACGCGAAGAGGAAGCCTTCACCA 1365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1374 ATGTCATCAAGGAGATGCGAGGCATGATCGAAGAAGGACGCGAAGAGGAAGCCTTCACCA 1315 Query 1366 AGTTTCCTCGAAACTACTTGACCTATGGAGAAAAGCTGAAAGCTATGATCTCACAGCGTC 1425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 AGTTTCCTCGAAACTACTTGACCTATGGAGAAAAGCTGAAAGCTATGATCTCACAGCGTC 1255 Query 1426 GTGACTTTTTCAAGAGCAACGGTGACCCTCACATCTGGCTTACTGGTACTCCTGGTTCTG 1485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1254 GTGACTTTTTCAAGAGCAACGGTGACCCTCACATCTGGCTTACTGGTACTCCTGGTTCTG 1195 Query 1486 GCAAGTCTGCCATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAATCTGGACAACC 1545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1194 GCAAGTCTGCCATCTTGCAGGTCATCTATCCTGCGTATTACAACAAGAATCTGGACAACC 1135 Query 1546 GTTTCTTCGACTTGTACCAGCCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGATC 1605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 GTTTCTTCGACTTGTACCAGCCAAAAGTGCACACGCACATGCTTCTTCAAGATGTCGATC 1075 Query 1606 ACACGACGGTTGAAAAGTTGGGAGTCCAGTTCCTAAAGACCATCTGTGACGAAGCTGGTT 1665 |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1074 ACACGACGGTTGAAAAGTTGGGAG--------------ACCATCTGTGACGAAGCTGGTT 1029 Query 1666 TCCCAGTTGACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTCTT 1725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1028 TCCCAGTTGACCAAAAGTACAAGACGCCGCAACTGGCTCGTACCACTGTCTTGGTCTCTT 969 Query 1726 CCAACTTCACCATCAACGATGTGATTCCGGAAGACATGCCAGGACGCAATGAAAATCTAA 1785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 968 CCAACTTCACCATCAACGATGTGATTCCGGAAGACATGCCAGGACGCAATGAAAATCTAA 909 Query 1786 CGGCTCTGCGTCGTCGCTTCTATGAAGTGAACGTTCGTGTTCTTTTGCAGATACTCGGAC 1845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 908 CGGCTCTGCGTCGTCGCTTCTATGAAGTGAACGTTCGTGTTCTTTTGCAGATACTCGGAC 849 Query 1846 TGAAGCTTCTGTCGAAGTACGAACTGAACGGCTTGAAACGCGTGGGAAATCAAGATCCAA 1905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 848 TGAAGCTTCTGTCGAAGTACGAACTGAACGGCTTGAAACGCGTGGGAAATCAAGATCCAA 789 Query 1906 CCAAACTCTTCATGTCGTGGGATTACACTCGTGACATTCCCACTGGAGAGTCGTTGAAGA 1965 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 788 CCAAACTCTTCATGTCGTGGGATTACACTCGTGACATTCCCACTGGAGAGTCGTTGAAGA 729 Query 1966 CTGCCAAGGAATACCAGCAGATCATCAAGGATCACTACTACGGAACGAACACTTCGCCTC 2025 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 728 CTGCCAAGGAATACCAGCAGATCATCAAGGATCACTACTACGGAACGAACACTTCGCCTC 669 Query 2026 ACTCGAGTCAGTAAGTAAAAGACGATGTGGGACTTAACACTGCCAGGATACAAGTATCTA 2085 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 668 ACTCGAGTCAGTAAGTAAAAGACGATGTGGGACTTAACACTGCCAGGATACAAGTATCTA 609 Query 2086 GGACCAGGAAACAAACTTGACAAGGGAGAATCAAATAACGAGAATGACAGAGTTGCTTTA 2145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 608 GGACCAGGAAACAAACTTGACAAGGGAGAATCAAATAACGAGAATGACAGAGTTGCTTTA 549 Query 2146 GCACATGATATTGCTTATGATTTCTTGGaaaaaaaaGGATTCAATCCATATACACAATAT 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 548 GCACATGATATTGCTTATGATTTCTTGGAAAAAAAAGGATTCAATCCATATACACAATAT 489 Query 2206 GGAAAAGACGATGAACGAGCATATCAAGAATTCTCATTTAACGATTACGGTGGAGCGCTA 2265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 488 GGAAAAGACGATGAACGAGCATATCAAGAATTCTCATTTAACGATTACGGTGGAGCGCTA 429 Query 2266 GGAAAACTGTACTTTGGTATAAAACGTAATGCAGCAAAAGCTGGATTAGTAGGACCACCA 2325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 428 GGAAAACTGTACTTTGGTATAAAACGTAATGCAGCAAAAGCTGGATTAGTAGGACCACCA 369 Query 2326 GGAAAGCGTCTTCGAGGAAAACATTGGGACGATAAAAAAGATGGTCAATCACCTGGAGAA 2385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 368 GGAAAGCGTCTTCGAGGAAAACATTGGGACGATAAAAAAGATGGTCAATCACCTGGAGAA 309 Query 2386 CCATCATTGCCGAATTCGACTGATAACGCACAAGTCAACTTCCAGAATACTATGAACGGA 2445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 308 CCATCATTGCCGAATTCGACTGATAACGCACAAGTCAACTTCCAGAATACTATGAACGGA 249 Query 2446 AATGGAAGTGGTGAAGGTGACGGGTCTGGTAACCAAGCCGGTCTTCGAGAGACTCCAATC 2505 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 248 AATGGAAGTGGTGAAGGTGACGGATCTGGTAACCAAGCCGGTCTTCGAGAGACTCCAATC 189 Query 2506 GATAATCCCTATGTCGTGTTCAGAGGACCACCAGACTATACGTTCGCGAGTCTGCCGTAT 2565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 GATAATCCCTATGTCGTGTTCAGAGGACCACCAGACTATACGTTCGCGAGTCTGCCGTAT 129 Query 2566 GTTGAAACGCGATACGCGGGTATTGCAGACTACTATTCGAGAGATCATATCTTTCGTCTG 2625 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 128 GTTGAAACGCGATACGCGGATATTGCAGACTACTATTCGAGAGATCATATCTTTCGTCTG 69 Query 2626 ACCTCACCATACGATTGTTCGCAAGCCAATTCTGTTGTTGGCATTAACGCTGGTGCTGGT 2685 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 68 ACCTCACCATACGATTGTTCGCAAGCCAATTCTGTTGTTGACATTAACGCTGGTGCTGGT 9 Query 2686 GTTACAAA 2693 |||||||| Sbjct 8 GTTACAAA 1 Score = 134 bits (148), Expect = 3e-28 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 3672 ATTGTGTTAAAGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 3731 || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2613 ATAGTGTGAAAGAAGGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 2672 Query 3732 GGTGGCAGAGCTCGAGCTCTAT 3753 |||||||||||||||||||||| Sbjct 2673 GGTGGCAGAGCTCGAGCTCTAT 2694 Score = 84.2 bits (92), Expect = 5e-13 Identities = 74/89 (83%), Gaps = 5/89 (6%) Strand=Plus/Plus Query 1 ATAGAGCTCGAGCTC--TGCCACCGCCGGG--TAAAACTAATAGAAAAGAAGTACAGCGC 56 ||||||||||||||| ||||||||||| | |||||| |||||||||||||||| |||| Sbjct 2721 ATAGAGCTCGAGCTCCATGCCACCGCCGTGACTAAAAC-AATAGAAAAGAAGTACGGCGC 2779 Query 57 TACGCTTGTACCTTCTTTCACACTATTCA 85 |||||| |||||||||| | |||| Sbjct 2780 TACGCTGCCGTCTTCTTTCACCATCTTCA 2808 Score = 78.8 bits (86), Expect = 2e-11 Identities = 59/66 (89%), Gaps = 5/66 (8%) Strand=Plus/Minus Query 3692 AGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTA--CCCGGCGGTGGCA--GAGCTCGAG 3747 |||||||||| |||||||||||||||| |||||| | ||||||||||| ||||||||| Sbjct 2785 AGCGTAGCGCCGTACTTCTTTTCTATT-GTTTTAGTCACGGCGGTGGCATGGAGCTCGAG 2727 Query 3748 CTCTAT 3753 |||||| Sbjct 2726 CTCTAT 2721 >seq6109 Length=1287 Score = 2195 bits (2434), Expect = 0.0 Identities = 1251/1272 (98%), Gaps = 1/1272 (0%) Strand=Plus/Minus Query 2482 GCCGGTCTTCGAGAGACTCCAATCGATAATCCCTATGTCGTGTTCAGAGGACCACCAGAC 2541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1287 GCCGGTCTTCGAGAGACTCCAATCGATAATCCCTATGTCGTGTTCAGAGGACCACCAGAC 1228 Query 2542 TATACGTTCGCGAGTCTGCCGTATGTTGAAACGCGATACGCGGGTATTGCAGACTACTAT 2601 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1227 TATACGTTCGCGAGTCTGCCGTATGTTGAAACGCGATACGCGGATATTGCAGACTACTAT 1168 Query 2602 TCGAGAGATCATATCTTTCGTCTGACCTCACCATACGATTGTTCGCAAGCCAATTCTGTT 2661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1167 TCGAGAGATCATATCTTTCGTCTGACCTCACCATACGATTGTTCGCAAGCCAATTCTGTT 1108 Query 2662 GTTGGCATTAACGCTGGTGCTGGTGTTACAAACATTACTCCTGAGAGCGCTGATGGAACG 2721 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1107 GTTGACATTAACGCTGGTGCTGGTGTTACAAACATTACTCCTGAGAGCGCTGATGGAACG 1048 Query 2722 TTGCAATCGGCCCGGTGGTTTAACTACTACTCCGGACTATACAACTACTATCATGTGGTA 2781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1047 TTGCAATCGGCCCGGTGGTTTAACTACTACTCCGGACTATACAACTACTATCATGTGGTA 988 Query 2782 TCGTGCCAGTACAATGTGTTTGTGGAGAACTTATCTACAGAACCTTTGTGGGTATACCGA 2841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 987 TCGTGCCAGTACAATGTGTTTGTGGAGAACTTATCTACAGAACCTTTGTGGGTATACCGA 928 Query 2842 CTCTTCTACAACGATGACCAGCCAAATACACTGGCTAGTAACGACGATATGCAGCTGTGG 2901 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 927 CTCTTTTACAACGATGACCAGCCAAATACACTGGCTAGTAACGACGATATGCAGCTGTGG 868 Query 2902 CCAAACACAATGTACCACTATCTCGATCGCCGTGCTCTTGCTATCACTGGAACTGGAAAA 2961 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct 867 CCAAACACAATGTACCACTATCTTGATCGACGTGCTCTTGCTATCACTGCAACTGGAAAA 808 Query 2962 GTTGAAGTTGCAGGAGAACATCCTGATGACACCATCAATGCTGAGAACATCAACTCGACT 3021 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 807 GTTGAAGTTGCAGGAGAACATCCTGATGACACCATCAATGCTGAGAACATCAACTCGACT 748 Query 3022 GCCTTGATAGACAATTTTGAGAATACGAACATGGTGGCAAACAATGGTGTATCCAAGTGT 3081 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 747 GCCTTGCTGGACAATTTTGAGAATACGAACATGGTGGCAAACAATGGTGTATCCAAGTGT 688 Query 3082 GTCATTTCTGGAGAATACCGTACTGGTCAACACACAGGAGAAATTCGTTTGGATTCATCA 3141 ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct 687 GTCATTTCTGGAGAATATCGTACTGTTCAACACACAAGAGAAATTCGTTTGGATTCATCA 628 Query 3142 GTTGAGAATTGGACGGCTACTAACACAAACCCTCTACTTCCGGAGAAACTATTGATTCGT 3201 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 GTTGAAAATTGGACGGCTACTAACACAAACCCTCTACTTCCGGAGAAACTATTGATTCGT 568 Query 3202 GTGAAGCCTGTGAATGATACAGTTCGTCTAAACAGTGCTACTAGTTCTGGTGACGATCTT 3261 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 GTGAAGCCGGTGAATGATACAGTTCGTCTAAACAGTGCTACTAGTTCTGGTGACGATCTT 508 Query 3262 AAGTACAAGATTGTTGTGAAGCTGAACTACCTTGTCGAGTTCAAGGAACTTCCTGTCGGT 3321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 507 AAGTACAAGATTGTTGTGAAGCTGAACTACCTTGTCGAGTTCAAGGAACTTCCTGTCGGT 448 Query 3322 CTACGTTATCCAGTGCAAAGACAACCTTTGACTGTTACAATTGCTGCTGACGTGGAGTCT 3381 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 447 CTACGTTATCCAGTGCAGAGACAACCTTTGACTGTTACAATTGCTGCTGACGTGGAGTCT 388 Query 3382 ACGAACTAATGGTTCACACAAGAAGGCAAATCCGTCGTGCGCACGATGACTATCTTCAAG 3441 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 ACAAACTAATGGTTCACACAAGAAGGCAAATCCGTCGTGCGCACGATGACTATCTTCAAG 328 Query 3442 CGATACGGAATTCGGTTGTACACCAACGACAACCAAGGCGTAACTTTTGGGATCAAGTGA 3501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 327 CGATACGGAATTCGGTTGTACACCAACGACAACCAAGGCGTAACTTTTGGGATCAAGTGA 268 Query 3502 GTCAACATGGATGGGAACAGATGCTTCTAAATGCGAGACGTCAAGTGTTTCCTAAGAGAT 3561 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct 267 GTCAACATGGATGGGAACAGATGCTTTTAAACGCGAGACGTCAAGTGTTTCCTAAGAGAT 208 Query 3562 ATAAACCAGAGGATACTGCGCATCGTCACCGTCTAGAAGGTGAGCAAGATAAGGATGTGT 3621 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 207 ATAAACCAGAGGATACTGCGCATCGTCACCGTCTAGAAGATGAGCAAGATAAGGATGTGT 148 Query 3622 CTGTGCGTAGTTATACCAGACGTAGTTTAAGAAAATGTATTTGATTTCTGATTGTGTTAA 3681 ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 147 CTGTGCGTAGTTATACCAGACGTAG-TTAAAAAAATTTATTTGATTTCTGATTGTGTTAA 89 Query 3682 AGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGCGGTGGCAGAG 3741 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 88 AGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGCGGTGGCAGAG 29 Query 3742 CTCGAGCTCTAT 3753 |||||||||||| Sbjct 28 CTCGAGCTCTAT 17 Score = 134 bits (148), Expect = 3e-28 Identities = 79/82 (96%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 1 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 76 Query 61 CTTGTACCTTCTTTCACACTAT 82 ||||||| |||||| |||| || Sbjct 77 CTTGTACATTCTTTAACACAAT 98 >seq6108 Length=2182 Score = 610 bits (676), Expect = 2e-171 Identities = 503/611 (82%), Gaps = 4/611 (1%) Strand=Plus/Plus Query 1 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1491 ATAGAGCTCGAGCTCTGCCACCGCCGGGTAAAACTAATAGAAAAGAAGTACAGCGCTACG 1550 Query 61 CTTGTACCTTCTTTCACACTATTCATACAATCATTCTTAAGACAAACAACAATCATTCAG 120 ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 1551 CTTGTACATTCTTTAACACTATTCATACAATCATTCTTAAGATAAACAACAATCATTCTG 1610 Query 121 ATGAAATGAGACATGTATTATGTAGTTACACATCCATGAAATCGCGCATTTCCTTTTCCG 180 | |||||||||||||||||||||| ||| ||||||||||| ||||||||||| | ||| | Sbjct 1611 ACGAAATGAGACATGTATTATGTACTTAAACATCCATGAAGTCGCGCATTTCTTCTTCAG 1670 Query 181 TCAGCTCCAAGATGTCGATGACCGAGTCACGATCATCTTCATCTTCTTGGGTTGGCTCCA 240 ||| |||||||||||| |||| |||||||||||| ||||| |||||||| |||||||||| Sbjct 1671 TCAACTCCAAGATGTCAATGATCGAGTCACGATCGTCTTCGTCTTCTTGCGTTGGCTCCA 1730 Query 241 TCACGATGGCCAAGTCCGACGGAAATCCAGCATTCGCTTCCGCAATCAAATGATGAAACT 300 ||| ||| ||||| |||| ||| ||||||||||| || || | |||| | | ||||||| Sbjct 1731 TCAAGATTGCCAAATCCGTCGGGAATCCAGCATTGGCCTCAGTTATCAGACGCTGAAACT 1790 Query 301 CGTCATCTTCGAACGCACAGTACGGGGCCCAACGCGCACGGGCCTCCGCGTTATTGATGA 360 | |||||||| |||| || ||||| |||||||| |||||||| || || || ||||||| Sbjct 1791 CTTCATCTTCAAACGAGCAATACGGTGCCCAACGAGCACGGGCTTCAGCATTGTTGATGA 1850 Query 361 AATATTCCCTCGCGATCAGATCCATCATCTCAATCG--CTGCATGCAAATCTCGCAGCTC 418 | || || ||||| || | |||||||||||| || |||| ||||||| || || Sbjct 1851 AGTACTCTCTCGCAATGATGTCCATCATCTCACACGCACTGC--GCAAATCAACTAGTTC 1908 Query 419 TTGCTGCATGCGACCGTTCAGTCCTCCCGCCATGTTGTACAACGTGTTCAGGCGAGTAAG 478 | |||| ||| ||| || || || ||||| ||| | | ||| || || ||||| || Sbjct 1909 ACGTTGCAAACGAGTGTTGAGACCCCCAGCCATATTGAATAGCGTATTGAGACGAGTTAG 1968 Query 479 GCGTAGACGCAACGCCTGCGCTTCGTTCAAGGCCGTACGTAGCTTGTCATGGAGCGCCTT 538 ||||| || | ||| |||||||| |||| || | || |||||| | || || || Sbjct 1969 ACGTAGGCGAAGCGCTTGCGCTTCATTCACCGCACTGCGAAGCTTGCTTAGTAGAGCGTT 2028 Query 539 GTTCTCTTCGACGATAAAACTCTCGACGAGTTCCGTCACGATGTTATGGTGTTGTTCGTG 598 ||| ||||| ||||| |||||||| |||||||| || |||||||| || | |||| ||| Sbjct 2029 GTTTTCTTCCACGATGAAACTCTCCACGAGTTCAGTGACGATGTTGTGTTCCTGTTGGTG 2088 Query 599 CGCCATGGCAG 609 ||||||||||| Sbjct 2089 CGCCATGGCAG 2099 Score = 143 bits (158), Expect = 6e-31 Identities = 81/82 (99%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 3672 ATTGTGTTAAAGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 3731 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1572 ATAGTGTTAAAGAATGTACAAGCGTAGCGCTGTACTTCTTTTCTATTAGTTTTACCCGGC 1513 Query 3732 GGTGGCAGAGCTCGAGCTCTAT 3753 |||||||||||||||||||||| Sbjct 1512 GGTGGCAGAGCTCGAGCTCTAT 1491 Score = 134 bits (148), Expect = 3e-28 Identities = 82/87 (94%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 2559 GCCGTATGTTGAAACGCGATACGCGGGTATTGCAGACTACTATTCGAGAGATCATATCTT 2618 || |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||| Sbjct 2096 GCAGTATGTTGAAACGCGATATGCGGATATCGCAGACTATTATTCGAGAGATCATATCTT 2155 Query 2619 TCGTCTGACCTCACCATACGATTGTTC 2645 ||||||||||||||||||||||||||| Sbjct 2156 TCGTCTGACCTCACCATACGATTGTTC 2182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11896716287170