Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq31292 98.7 1e-18 seq36484 95.1 1e-17 seq27723 91.5 2e-16 >seq31292 Length=580 Score = 98.7 bits (108), Expect = 1e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 313 TACACCATTCATGTAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 255 >seq36484 Length=4223 Score = 95.1 bits (104), Expect = 1e-17 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 169 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3159 TACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGGCC 3215 >seq27723 Length=2493 Score = 91.5 bits (100), Expect = 2e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 115 CACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 169 |||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 270 CACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGGCC 324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547004244672