Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq32429 102 2e-19 seq33442 73.4 8e-11 >seq32429 Length=2657 Score = 102 bits (112), Expect = 2e-19 Identities = 94/117 (80%), Gaps = 3/117 (3%) Strand=Plus/Plus Query 33 CGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGT 92 ||| |||| |||||||| |||| ||| |||||||||| ||||||||||||||||| Sbjct 2237 CGGTATTG-CTGGATCAAGCTTGCGCTCATTGTCCAAAATTCCCCACTGCTGCCT--TTA 2293 Query 93 AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTA 149 | ||| ||| |||||||||||| ||| |||| ||||||| || ||| ||||| || Sbjct 2294 AAAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCAATCTTTCAAACCAGCTA 2350 >seq33442 Length=9599 Score = 73.4 bits (80), Expect = 8e-11 Identities = 54/62 (87%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 26 ACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGC 85 || ||| ||| |||| |||||||| |||| ||| |||||||||| ||||||||||||||| Sbjct 2071 ACTCACTCGGTATTG-CTGGATCAAGCTTGCGCTCATTGTCCAAAATTCCCCACTGCTGC 2129 Query 86 CT 87 || Sbjct 2130 CT 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071604131840