Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2459 100 2e-19 seq7158 73.4 2e-11 >seq2459 Length=3073 Score = 100 bits (110), Expect = 2e-19 Identities = 70/76 (92%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 2216 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 2273 Query 109 TAATACAACGCAAGCT 124 |||| ||||||| ||| Sbjct 2274 TAAT-CAACGCATGCT 2288 >seq7158 Length=225 Score = 73.4 bits (80), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 219 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 162 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||| || |||| Sbjct 161 GGACGTAAT-CAATGCCAGCT 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300695863040