Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq26807 77.0 6e-12 seq26806 77.0 6e-12 >seq26807 Length=5677 Score = 77.0 bits (84), Expect = 6e-12 Identities = 141/204 (69%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 52 GCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAA 111 ||| ||| | ||||| ||||| || ||| |||||| |||||| | | | Sbjct 3059 GCGCATTTCGGGCCGCCGCGTGCACCCGGCCAGCGGCCGCAGCTACCACGTCAAGTTCGC 3000 Query 112 TCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGA 171 ||||| ||||| || ||||||||||| ||||| ||||| |||| | ||||||||||| Sbjct 2999 CCCGCCCAAGGTGGCCGGCAAGGACGACGTGACGGGCGAGCCCCTGATCCAGCGCAAGGA 2940 Query 172 CGACACCGAAGAAACCGTTCGTCAC-CGCCTGTCTGTTTACCATTCGCAAACCAAGCCGC 230 ||||| ||| | | || ||| | | ||||| | | ||| ||| || |||| Sbjct 2939 CGACAACGAGGCCA-CGCTCGGCTCACGCCTCCAGGCCTTCCACAAGCAGACGCAGCCCG 2881 Query 231 TGGTGGACTTCTACCAGAAGCTGG 254 || | |||||||||| |||| || Sbjct 2880 TGATCGACTTCTACCGCAAGCAGG 2857 >seq26806 Length=5667 Score = 77.0 bits (84), Expect = 6e-12 Identities = 141/204 (69%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 52 GCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAA 111 ||| ||| | ||||| ||||| || ||| |||||| |||||| | | | Sbjct 3059 GCGCATTTCGGGCCGCCGCGTGCACCCGGCCAGCGGCCGCAGCTACCACGTCAAGTTCGC 3000 Query 112 TCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGA 171 ||||| ||||| || ||||||||||| ||||| ||||| |||| | ||||||||||| Sbjct 2999 CCCGCCCAAGGTGGCCGGCAAGGACGACGTGACGGGCGAGCCCCTGATCCAGCGCAAGGA 2940 Query 172 CGACACCGAAGAAACCGTTCGTCAC-CGCCTGTCTGTTTACCATTCGCAAACCAAGCCGC 230 ||||| ||| | | || ||| | | ||||| | | ||| ||| || |||| Sbjct 2939 CGACAACGAGGCCA-CGCTCGGCTCACGCCTCCAGGCCTTCCACAAGCAGACGCAGCCCG 2881 Query 231 TGGTGGACTTCTACCAGAAGCTGG 254 || | |||||||||| |||| || Sbjct 2880 TGATCGACTTCTACCGCAAGCAGG 2857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898867943424