Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2459 91.5 2e-16 seq32142 78.8 1e-12 >seq2459 Length=3073 Score = 91.5 bits (100), Expect = 2e-16 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 ||| ||| | | ||||||||| ||||||||||| || |||||||| |||| || ||| Sbjct 3073 GGATGTGTGATCCTATTTTGTTGGTTTCTAGGATTACC-GTAATGATTAATAGGGTCAGT 3015 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 ||||| | ||||| ||||||| |||||||||||||||||| || Sbjct 3014 TGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTCTTGGATTGAT 2968 >seq32142 Length=9645 Score = 78.8 bits (86), Expect = 1e-12 Identities = 98/132 (74%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 56 GAATACATTACCATGGAATAATAGAATA-GGACGTGCGGTTCTATTTTGTAGGTTTCTAG 114 |||||||||| |||||||||||| ||| || | || | |||||||||| ||||| | Sbjct 2462 GAATACATTAGCATGGAATAATAAGATACGGCCTTGGTGGTCTATTTTGTTGGTTTGCAC 2403 Query 115 GACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTG 174 | | |||||||| || | ||| ||| |||||| | |||| | |||| |||| Sbjct 2402 ACCAGG--GTAATGATTAACAGGGACAGTTGGGGGTATTCTTATTTCAGCGTCAGAGGTA 2345 Query 175 AAATTCTTGGAT 186 |||||||||||| Sbjct 2344 AAATTCTTGGAT 2333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511816837120