Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pinifolia_20[genbank_20GCA_5F000500225.2_202016-07- 21] 36,928 sequences; 94,617,303 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq42 78.8 2e-12 >seq42 Length=315 Score = 78.8 bits (86), Expect = 2e-12 Identities = 83/107 (78%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||||| | |||| | || |||||||||||| ||||||| || | |||| Sbjct 162 TGGCGAAGGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGTGTAGCAC 104 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 || |||||||| |||| |||||| || || ||||||||||| | ||| Sbjct 103 ACGGGATTAGAGACCCCGGTAGTTCATGCTGTAAACGATGAGTGCTA 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202755682304