Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1098 77.0 6e-12 >seq1098 Length=31895 Score = 77.0 bits (84), Expect = 6e-12 Identities = 151/221 (68%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 35 GACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTG 94 ||||| | | | || |||| ||||| ||||| ||||| || ||| |||||| Sbjct 14181 GACGAGGTGCTGGTGGAGCGCATTGCCGGCCGCCGCGTGCACCCGGCCAGCGGCCGCAGC 14122 Query 95 TACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGAC 154 |||||| | | | ||||| ||||| || ||||||||||| | || ||||| | Sbjct 14121 TACCACGTCAAGTTCGCCCCGCCTAAGGTGGCCGGCAAGGACGACATCACGGGCGAGCCC 14062 Query 155 CTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCAC-CGCCTGTCTGTTTACCA 213 ||| | |||||||||||||||| ||| | | || ||| | | || || | | ||| Sbjct 14061 CTGATCCAGCGCAAGGACGACAACGAGGCCA-CGCTCGGCTCGCGTCTCCAGGCCTTCCA 14003 Query 214 TTCGCAAACCAAGCCGCTGGTGGACTTCTACCAGAAGCTGG 254 ||| ||| |||| || | |||||||||| |||| || Sbjct 14002 CAAGCAGACCCAGCCTGTGATCGACTTCTACCGCAAGCAGG 13962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899127317664