Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pisi_20[genbank_20GCA_5F000751395.1_202014-07-22] 8,083 sequences; 58,815,051 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3027 181 3e-43 >seq3027 Length=48372 Score = 181 bits (200), Expect = 3e-43 Identities = 121/135 (90%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 || ||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct 2082 CGAGTCACTAGTTAGATGACGAGGCATCTGGCTACCTTACGAGAGTCATAGTTACTCTCG 2141 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||||||| ||||| |||||||| |||||| |||| |||||||||||||| || ||||| Sbjct 2142 CCGTTTACCTGCGCTCGGTTGAATCTCTTCAATTTGCCATTCAGAGCACTGAGCTGAAAT 2201 Query 519 CACATTGCGTCAACA 533 |||||| ||||||| Sbjct 2202 TACATTGTGTCAACA 2216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635067826784