Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq251 237 5e-60 >seq251 Length=39386 Score = 237 bits (262), Expect = 5e-60 Identities = 356/498 (71%), Gaps = 36/498 (7%) Strand=Plus/Plus Query 8 GCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTT 67 ||||| |||||| ||||||||||||||||| | |||||||||||||||||||||||| Sbjct 3865 GCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTTT 3924 Query 68 AATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGAT 127 ||||||| ||||| ||||||||||||| ||||| || | | | | || Sbjct 3925 AATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATAT 3973 Query 128 AGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGT 187 | | ||| || | | | ||||| | ||||||| |||||||||||||||| Sbjct 3974 AAAATTTT----TT-----TATA-AAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGTGT 4023 Query 188 CGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--TCA 245 |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | | Sbjct 4024 TGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTAATTTA 4083 Query 246 TTAAGTT-------GGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 |||| | | ||||||| | ||| | ||||||||||| Sbjct 4084 TTAAAATAAAATAAAAGTACTCTAACAAAAAAATTAATGATAGGTTAATGGAAGGTGGGG 4143 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | |||||||| || ||||| ||||||||| ||||||||||||||||||||||| || ||| Sbjct 4144 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAAT-GATAAT 4202 Query 359 -ACAA--AG-GGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 |||| || |||| | || | ||||||| | |||| | ||| ||||| Sbjct 4203 CACAACCAGAGGCAATAATGATAAAAGTTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 4261 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 4262 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 4321 Query 475 TGCTACGGTGAATACGTT 492 || | ||||||||| ||| Sbjct 4322 TGTTGCGGTGAATATGTT 4339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503936516160