Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq251 77.0 7e-12 >seq251 Length=39386 Score = 77.0 bits (84), Expect = 7e-12 Identities = 147/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 67 TTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTG 126 |||| ||| | || ||||| ||||||| | | |||||||| |||| | | Sbjct 3451 TTTTCCTCCTTAATGAAAGAGCTTTACAACCTAATTAGCCTTCATCACTCACTCGGTATT 3392 Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| ||| || || ||||| |||| ||||| ||||||||||| | ||||| Sbjct 3391 GCTGGATCAAGCTTCCGCTCATTGTCCAAAATTCCCCACTGCTGCCT-TTAAAAAAGTTT 3333 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| ||||||||| || | | || ||| | | ||| || |||| Sbjct 3332 GGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGG 3273 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACC-TAAT 279 || ||| | | ||| | || |||||| |||| Sbjct 3272 CTTGGTAGTCTATTAAACTACCAACTACCATAAT 3239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068754885952