Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314425.1_202015-10- 14] 4,221 sequences; 53,621,061 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq88 129 1e-27 seq757 118 2e-24 >seq88 Length=70487 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 5128 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAAATGCGGTTAGCTGAAAAGCTAGT 5071 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5070 GCCGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 5013 >seq757 Length=30557 Score = 118 bits (130), Expect = 2e-24 Identities = 98/117 (84%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||| | | |||| || | | Sbjct 26851 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAAATGCCGTTAGCTGAAAAGCTAAT 26794 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 26793 GCCGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 26737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819166502144