Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq256 255 1e-65 >seq256 Length=39382 Score = 255 bits (282), Expect = 1e-65 Identities = 272/359 (76%), Gaps = 10/359 (3%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | | | ||| ||||| |||||||| | ||||||| | | ||||| Sbjct 38650 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 38591 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 || || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 38590 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 38531 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||||||||||||||||||| || | | | | ||| | |||| | | Sbjct 38530 GAGTTACGGCCGCCGTTTACTGGGACT---------TCCATTTAATGCGCAAACATCTTC 38480 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||||||||||||||| ||||| |||||||||| | || | | ||||||| Sbjct 38479 TTTTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 38420 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCATAGACA 305 | ||| |||||| ||||||||||| |||||| | || ||| | ||| | Sbjct 38419 AGTCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTTTGTGACACCTAATTATAATTA 38360 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 || || || |||| ||||||| |||||||||||||||||||| | ||||||||| Sbjct 38359 GGTACTTTTTATCCCGAAGTTACAAAGTCATTTTGCCGAGTTCCTTCAATATAGTTCTC 38301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062342662272