Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq256 122 1e-25 >seq256 Length=39382 Score = 122 bits (134), Expect = 1e-25 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | | |||| |||||||||| |||| | ||| ||||||| Sbjct 38681 CGGGGTCTTTCCGTCTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTG 38622 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | ||||||| |||||||||| ||||||||||||||||||| Sbjct 38621 AGTCTATATTGGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCC 38562 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||||||||||| Sbjct 38561 GACAAGGAATTTCGCTACCTTAGGACCGT 38533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547171390503