Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq256 118 4e-24 >seq256 Length=39382 Score = 118 bits (130), Expect = 4e-24 Identities = 178/252 (71%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115 ||||||||||| || || ||||| || | |||||||| || |||||||||| Sbjct 37702 ATTCGGAGTTTCCAAGAATTTAGTAAGTTTTTACACCCCCTAGCTCAATGAGTGCTCTAC 37643 Query 116 CTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCAC 175 | || || | | | ||| || | ||| |||||| ||| ||||||||||| | Sbjct 37642 C-CCAAAAAAAGATTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTATCTC 37584 Query 176 GAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGT 235 ||||||||| ||||||||| |||| ||||| ||||| || | ||| | || || || Sbjct 37583 TGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACATATGT 37524 Query 236 GGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTC 295 | ||||| |||||| || ||||| ||||| ||| ||||| ||||||||| Sbjct 37523 GAGTTCGATCCTCCCAATAGTTTTACCTATTTTTCAATCTGTTCATGGTTAGATCACTCA 37464 Query 296 GCTTCGGGTCTT 307 | |||||||||| Sbjct 37463 GTTTCGGGTCTT 37452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817501904128