Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq256 118 2e-24 >seq256 Length=39382 Score = 118 bits (130), Expect = 2e-24 Identities = 143/191 (75%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || |||||| | || |||||| | || || || ||| ||||| |||| Sbjct 37943 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGTGCAAAAAAACTAGACCAATGAG 37884 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||| ||||| ||||||||||||||||||||| |||| |||||||| Sbjct 37883 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTACTGGTTGTAATTATTT 37824 Query 332 CTCCACATCCTTTCCCACTGAG-TCACCACTTAGGGGCCTTAGCTGAT-GATCTGGGCTG 389 | ||| |||||| |||| || | | |||| | ||||||| ||| ||| |||||| Sbjct 37823 TTTCACTTCCTTTTTCACTTAGAATATTATTTAGAGACCTTAGC-GATCAATCAGGGCTG 37765 Query 390 TTTCCCTCTCG 400 ||||||||||| Sbjct 37764 TTTCCCTCTCG 37754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177536444928