Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq256 154 5e-35 >seq256 Length=39382 Score = 154 bits (170), Expect = 5e-35 Identities = 308/449 (69%), Gaps = 7/449 (2%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 ||||||||||| ||||||||| ||||| ||| |||| ||||| || ||| Sbjct 37453 AGACCCGAAACTGAGTGATCTAACCATGAACAGATTGAAAAATAGGTAAAACTATTGGGA 37512 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 37513 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 37572 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || |||||| || |||||||||| || ||||| ||||| | |||| || | | ||| Sbjct 37573 AATCAAACTCAGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTTAAAATC 37632 Query 214 ACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 | ||||||||||||| | |||||||||| | |||||| ||| ||| Sbjct 37633 TTTTTTTGGGGTAGAGCACTCATTGAGCTAGGGGGT-GTAAAAACTTACTAAATTCTTGG 37691 Query 274 AAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTG 333 ||||||||||| | | | | | | || || | || ||||||||| | Sbjct 37692 AAACTCCGAATACAAAAAAATGTAATTTAAATAGACAGACATTAGGCGCTAAGGTCTTTT 37751 Query 334 CCCGAGAGGAGAAGAATCCGGACT-ATCAGCTAAGGCCCCGAAATGACA-GCTAAGTTAA 391 ||||||| || | || || | ||| ||||||| | | |||| | | |||||| || Sbjct 37752 GTCGAGAGGGAAACAGCCCTGATTGATC-GCTAAGGTCTCTAAATAATATTCTAAGTGAA 37810 Query 392 ACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTT 451 | || ||||| | | ||| | || | || |||||||||||||||| || ||| Sbjct 37811 A--AAGGAAGTGAAAAAATAATTACAACCAGTAGGTAGGCTTGGAAGCAGCCA-TCCTTT 37867 Query 452 AAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||| |||||| |||||| | ||| || Sbjct 37868 AAAGAAAGCGTAATAGCTCATTGGTCTAG 37896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689508812288