Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq256 194 6e-47 >seq256 Length=39382 Score = 194 bits (214), Expect = 6e-47 Identities = 373/550 (68%), Gaps = 34/550 (6%) Strand=Plus/Minus Query 18 CAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGAT--TGCCAACCAGGCTGAGGGA 75 ||||||||| ||| | | |||||||| || |||| | | ||| |||| Sbjct 38956 CAGTCAAGCAAGCTTTTACCATTACACTCTACAATTGATAATATTATCCAATTTGAGCTT 38897 Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCA 135 ||||||| | |||||||||| ||||||||| | |||||||||| |||||||| |||| Sbjct 38896 ACCTTTGTACACCTCCGTTACTCTTTGGGAGGTGA-CCGCCCCAGTCAAACTACCAACCA 38838 Query 136 GGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGT 195 ||||||| | | | | || |||| ||| | | | |||||||| Sbjct 38837 TACACTGTCT-------ATTTAAAGA---AATATTAGTTATTTATTTTAATAAGAGTGGT 38788 Query 196 ATTTCAACAACGACTCCACAA-CCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCT 254 ||||||| | || |||| |||||||| | | || | |||| ||| || Sbjct 38787 ATTTCAAAGATATCTAAACAATTTACTAGCGTAAAGATCTAAAAGATTACCACTTATTCT 38728 Query 255 ACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGG-TCCCGGGGTCTTTTCGT 313 ||||| | | ||| ||||| ||| | |||| |||| || |||||||||| ||| Sbjct 38727 ACACATATTAGATAAAATAACAATATAAAGATGTAGTAAAGGTTCACGGGGTCTTTCCGT 38668 Query 314 CCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAG 373 | | ||| ||||||| || || | ||| ||||| | | || | | ||| Sbjct 38667 CTAACTATAGAAAATCCGCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAG 38608 Query 374 ACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCG 433 ||||| ||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 38607 ACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCG 38548 Query 434 CTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCA 493 ||||||||||| || | |||||| ||||||||||||||| |||| ||| Sbjct 38547 CTACCTTAGGACCGTCAGAGTTACGGCCGCCGTTTACTGGGACTTCCATT---------- 38498 Query 494 CACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTC 553 | || || || | || |||| |||||||||||||||||| ||||| | Sbjct 38497 ---------TAATGCGCAAACATCTTCTTTTAATCTTCCAGCACCGGGCAGGTGTCAGAC 38447 Query 554 CGTATACCTC 563 | ||||| || Sbjct 38446 CCTATACATC 38437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702308121472