Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20pluvialis_20[genbank_20GCA_5F001314455.1_202015-10- 14] 5,397 sequences; 52,734,927 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1926 129 1e-27 seq809 118 2e-24 >seq1926 Length=11180 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 2845 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAAATGCGGTTAGCTGAAAAGCTAGT 2902 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2903 GCCGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 2960 >seq809 Length=30912 Score = 118 bits (130), Expect = 2e-24 Identities = 98/117 (84%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||| | | |||| || | | Sbjct 4262 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAAATGCCGTTAGCTGAAAAGCTAAT 4319 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4320 GCCGCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG 4376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819157169408