Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1950 143 5e-32 >seq1950 Length=9356 Score = 143 bits (158), Expect = 5e-32 Identities = 96/107 (90%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTT 247 |||||||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| Sbjct 9354 TGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCGCTAGCTTAAAATTC 9295 Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | ||||||||||||||||||||| |||||| |||||||||||| Sbjct 9294 TAAAGAACTAAAGGATCGATAGGCCACGCTTTCACGGTTTGTATTCA 9248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854377990656