Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000149735.1_202008-03-03] 2,576 sequences; 66,652,401 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2517 86.0 2e-11 >seq2517 Length=327626 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 |||||||| || ||||||| | ||||||| | | ||| || ||| ||||| || || Sbjct 127213 GTCATACGCGACGGAATGGCGTGAGGGTTCACAACGATATCCGGCGTGATGCCCTCCACG 127272 Query 364490 GTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 ||||| ||||| ||||| || || ||| | | |||||| || ||||| || | | || Sbjct 127273 GTAAACGGCATGTCTTCTTGGCGGTACG-TCATACCAATCGTACCCTTCTGTCCGTGACG 127331 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 || ||||||||||| ||||| Sbjct 127332 CGATGCAAACTTGTCACCAAT 127352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884824189324368