Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F000336535.2_202015-10-27] 4,552 sequences; 47,709,731 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq633 73.4 7e-11 >seq633 Length=61227 Score = 73.4 bits (80), Expect = 7e-11 Identities = 148/220 (67%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 35 GACGAAGAGATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTG 94 ||||| | | | || ||||||| || ||||| ||||| || || || |||||| Sbjct 24231 GACGAGGTGCTCGTGGAGCGTATCGCGGGCCGCCGCGTGCACCCGGCTTCTGGCCGCAGC 24172 Query 95 TACCACACCGTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGAC 154 |||||| | | | ||||| |||| | ||||| ||||| | || ||||| | Sbjct 24171 TACCACGTCAAGTTCGCCCCGCCTCAGGTGGATGGCAAAGACGACATCACGGGCGAGCCC 24112 Query 155 CTGGTACAGCGCAAGGACGACACCGAAGAAACCGTTCGTCACCGCCTGTCTGTTTACCAT 214 ||| | |||||||||||||||| ||| | ||| | || ||||| | || ||| Sbjct 24111 CTGATCCAGCGCAAGGACGACAACGAGGCCACCCTGGGTTCGCGCCTTCAGGCTTTCCAC 24052 Query 215 TCGCAAACCAAGCCGCTGGTGGACTTCTACCAGAAGCTGG 254 ||| || |||| || | |||||||||| |||| || Sbjct 24051 AAGCAGACGCAGCCCGTGATCGACTTCTACCGCAAGCAGG 24012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899159068416