Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933335.1_202017-01-04] 4,449 sequences; 38,872,710 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq976 210 9e-52 >seq976 Length=10573 Score = 210 bits (232), Expect = 9e-52 Identities = 153/176 (87%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 512 GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAAGAGCATAGCTGTT 567 |||| ||||||||||| ||| | ||||| || ||||||||| ||||| | |||| Sbjct 10531 GCACTATCGACCGATCATGA-GCCTTCGTGGTGAAAGATTTGAGTTTGAGCACATATGTT 10473 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 10472 GGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGG 10413 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||| |||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct 10412 AAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 10357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079904568950