Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933345.1_202017-01-04] 4,625 sequences; 39,143,447 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1593 98.7 3e-18 >seq1593 Length=4804 Score = 98.7 bits (108), Expect = 3e-18 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | Sbjct 2123 GGGACTAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATACC 2182 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 | |||||| || |||||| | || | ||| |||| || ||| | | | | Sbjct 2183 TAGACAAAGAGCTGCGAAAATGTGAATTTTAGCTAATCTCAAAAAATAGGATATAAAAAG 2242 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 |||||||||||| || ||||||||||||| | ||| ||||||||||| |||| ||| Sbjct 2243 GATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCAT 2302 Query 476 GCTACGGTGAATAC 489 | ||||||||||| Sbjct 2303 GACACGGTGAATAC 2316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503930440000