Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933395.1_202017-01-04] 4,666 sequences; 39,265,443 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1888 141 5e-32 >seq1888 Length=3642 Score = 141 bits (156), Expect = 5e-32 Identities = 102/117 (87%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || |||| | |||||| || || Sbjct 522 GAACCCAAACACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATGA--ATAACACCGTCC 465 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 464 AATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278387821740