Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933395.1_202017-01-04] 4,666 sequences; 39,265,443 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1091 98.7 3e-18 >seq1091 Length=8627 Score = 98.7 bits (108), Expect = 3e-18 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | Sbjct 6061 GGGACTAAGACAAGTCATCATGGCCTTGATATTGTGGGCTATAGACGTGCCACATATACC 6120 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 | |||||| || |||||| | || | ||| |||| || ||| | | | | Sbjct 6121 TAGACAAAGAGCTGCGAAAATGTGAATTTTAGCTAATCTCAAAAAATAGGATATAAAAAG 6180 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 |||||||||||| || ||||||||||||| | ||| ||||||||||| |||| ||| Sbjct 6181 GATTGTAGTCTGAAATTCGACTATATGAATAAGTAATTACTAGTAATCGTGAATCACCAT 6240 Query 476 GCTACGGTGAATAC 489 | ||||||||||| Sbjct 6241 GACACGGTGAATAC 6254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503929823360