Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933395.1_202017-01-04] 4,666 sequences; 39,265,443 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1888 242 4e-62 >seq1888 Length=3642 Score = 242 bits (268), Expect = 4e-62 Identities = 166/186 (89%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| |||||| ||||||||||||||||||||| | || | |||||||| |||||||||| Sbjct 151 GGAAACAGGACATTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 210 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| Sbjct 211 CATTAGCATGGAATAATAAAATAGGACGCGCGGTTCTATTTTGTTGGTTTATAGGACCG- 269 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||| ||||| ||||||||||| Sbjct 270 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAAATGTCAGAGGTGAAATTC 329 Query 181 TTGGAT 186 |||||| Sbjct 330 TTGGAT 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511976856640