Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933405.1_202017-01-04] 4,562 sequences; 39,184,277 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1019 224 3e-56 >seq1019 Length=9556 Score = 224 bits (248), Expect = 3e-56 Identities = 182/218 (83%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCAT 347 || ||||||| ||||||||||| | ||| |||| ||| ||| || |||| Sbjct 352 GCATTGGTTTCA-ATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTGATGCAT 294 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407 ||||||||||||||||||| |||| |||||| |||||||||||||||| | | || ||| Sbjct 293 GTATTAGCTCTAGAATTACTACGGGTATCCAAGTAGTAAGGTACTATCGAGTGGACTATA 234 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCA 466 |||||| ||||||||||||||||||||||| ||| | | || ||||||||||||||||| Sbjct 233 ACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAAAGTGTTTATACTTAGACATGCA 174 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| ||||||||||||||| Sbjct 173 TGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510331095552