Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933415.1_202017-01-04] 4,707 sequences; 39,189,079 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq4175 197 3e-48 >seq4175 Length=1187 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | | ||| ||||| ||||||||||| |||||| |||||||||||||||| Sbjct 92 GGGACAGTGCCTGATGGGTAGTTTAACTGGGGCGGTTGCCTCCTAAAGAGTAACGGAGGC 151 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 |||||||| | |||||||| ||| || || || | | |||| || ||| ||||| | Sbjct 152 GCCCAAAGGTTCCCTCAGCCTGGTCGGCAATCAGGTGTTGAGTGTAAGTGCACAAGGGAG 211 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| || | || || ||||||||||||||||||| || |||||||||||| Sbjct 212 CTTGACTGTGAGAGTGACAGCTCGAGCAGGGACGAAAGTCGGGACTAGTGATCCGGCGGT 271 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||||||||||| ||||||||||| |||| ||||||| Sbjct 272 ACATTGTGGAATGGCCGTCGCTCAACGGATAAAAGGTACCTCGGGGATA 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982353758432