Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933415.1_202017-01-04] 4,707 sequences; 39,189,079 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq4175 82.4 5e-14 >seq4175 Length=1187 Score = 82.4 bits (90), Expect = 5e-14 Identities = 105/140 (75%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG--CCACCGGATCACTATGACC 58 ||||||||||||||||||||| |||| ||||| || | || ||||||||||| || Sbjct 309 TACCTTTTATCCGTTGAGCGACGGCCATTCCA--CAATGTACCGCCGGATCACTAGTCCC 252 Query 59 TGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| || ||| ||||| || |||||| | ||| ||| || |||| Sbjct 251 GACTTTCGTCCCTGCTCGAGCTGTCACTCTCACAGTCAAGCTCCCTTGTGCACTTACACT 192 Query 119 -ATCACTACGATTTCCGACC 137 | ||| |||| |||||| Sbjct 191 CAACAC-CTGATTGCCGACC 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351984466900