Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933415.1_202017-01-04] 4,707 sequences; 39,189,079 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq4175 302 7e-80 >seq4175 Length=1187 Score = 302 bits (334), Expect = 7e-80 Identities = 227/267 (85%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||||||||| |||||| ||||| | || ||| ||||| |||| |||| Sbjct 637 GCTTCCCGCTTAGATGCTTTCAGCGGTTATCAATCCCGAACGTAGCTAATCAGCGATGCT 578 Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128 | |||| | ||||||| |||||||||| |||| |||||||||||||||||||||||| Sbjct 577 CCTGGCGGAACAACTGACATACCAGAGGTTCGTCCGTCCCGGTCCTCTCGTACTAAGGAC 518 Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 || | | ||||||||| |||| | | |||||||||||||||||||||| |||||||| Sbjct 517 AGGCCTCCACAAATTTCCAACGCACGCAGCGGATAGGGACCGAACTGTCTCACGACGTTC 458 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| || Sbjct 457 TGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCAACTCCA 398 Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||| ||||||||||||||| Sbjct 397 GCCCCAGGATGCGACGAGCCGACATCG 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780764396252