Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933415.1_202017-01-04] 4,707 sequences; 39,189,079 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4175 289 1e-75 >seq4175 Length=1187 Score = 289 bits (320), Expect = 1e-75 Identities = 201/227 (89%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | |||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 236 TCGAGCTGTCACTCTCACAGTCAAGCTCCCTTGTGCACTTACACTCAACACCTGATTGCC 177 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| Sbjct 176 GACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTAGGAGG-CAACCGCCCCAG 118 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||| ||||||||||||| |||| ||||| ||||| | ||||||| |||| Sbjct 117 TTAAACTACCCATCAGGCACTGTCCCTGACCCGGATCACGGGCCGAAGTTAGATGTCCAG 58 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTG 227 | |||||||||||||||||||||||||||| |||||||||||| Sbjct 57 AGTGACCAGAGTGGTATTTCAACAACGACTCCACCACCACTAGCGTG 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702319868032