Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq4782 91.5 2e-13 >seq4782 Length=1171 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 196784 TGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCGTCT 196843 || ||||| || ||||| ||||| ||||||| || || |||||||||||||| || Sbjct 143 TGCCAGCTCTACCAGCGCTCGGCGGACCTGTTCCTGGGCGTGCCGTTCAACATCGCCTCC 84 Query 196844 TACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGTT 196903 ||||| |||| | ||| |||| || ||| || |||| || ||||||||||| Sbjct 83 TACGCGCTGCTCACCGTGATGTTGGCCCAGCAGTGCGACCTGGTGCCCGGCGAGTTCGTG 24 Query 196904 TGGACTGGCGGTGACGTCCACAT 196926 ||||| ||||| ||| |||||| Sbjct 23 TGGACCGGCGGGGACTGCCACAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771490533062160