Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20ramorum_20[genbank_20GCA_5F001933465.1_202017-01-04] 5,378 sequences; 40,428,501 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq3393 82.4 1e-10 >seq3393 Length=1801 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 19520 ACATTTTTATTCCTCTATAGCTCAATCGGCAGAGCATCTGACTGTTAATCAGAGGGTTCC 19579 |||| | ||||| | ||||||||| |||||||||| ||||||||||| |||||| | Sbjct 1080 ACATGTGCATTCCCCCGTAGCTCAATTGGCAGAGCATTCGACTGTTAATCGAAGGGTTAC 1021 Query 19580 TGGTTCGAGTCCAGGTGGAGGAG 19602 |||||||||||||| || |||| Sbjct 1020 TGGTTCGAGTCCAGTCGGGGGAG 998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634037373972000